Gene SeD_A3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3579 
Symbol 
ID6874810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3437274 
End bp3437966 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID642786567 
ProductSanA protein 
Protein accessionYP_002217203 
Protein GI198242619 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.129921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAC AATGTGCCCG TTTTATCCGC CGCCTCTGTT TTACACGCCG GGCGTTAACA 
GTGGCGTGTT TTCTGCTTGT CGCAGCAGGC GTCGCGCTTT TCTATTCCAA CTGGCTTATC 
GTCAACGCCT CACAGCATCT GACATGGAAT GACATTCAGA CCGTTCCCGC CCGCAACGTC 
GGGCTGGTGT TAGGCGCTAA ACCCGGCAAT CGGTATTTTA CCCGGCGGAT TAATACTGCC 
GCCGCGTTGT ATCACGCCGG TAAAGTGAAG TGGCTGTTAG TCAGCGGCGA CAATGGCAAA 
AAAGAGTACG ATGAACCTTC GGCGATGCAG CAGGCGCTGA TAGCGAAAGG TGTGCCGGAA 
GCGGCCATTT TTTGTGATTA TGCCGGATTC TCCACGCTGG ACTCCGTAGT TCGCGCCCGG 
AAAGTGTTTG GCGAAAGACG CATTACGATT ATCTCGCAAG CATTCCATAA TCAACGGGCG 
ATCTGGCTGG CGCAACAATA TGGCATAGAC GCTATCGGCG TTAACGCGCC GGATCTGAAT 
AAAAGGCACG GAACCTACAC ACGACTTCGG GAAAAGCTGG CGCGGGTTAG CGCGGTGCTG 
GATGCCAAAA TTTTGCACCG TCAGCCTAAA TATCTGGGCG CTGGCGTCAC TATTGGGGCT 
GATAGCGCAC ACGGGTGCCC TTCTCGCCAG TAA
 
Protein sequence
MLSQCARFIR RLCFTRRALT VACFLLVAAG VALFYSNWLI VNASQHLTWN DIQTVPARNV 
GLVLGAKPGN RYFTRRINTA AALYHAGKVK WLLVSGDNGK KEYDEPSAMQ QALIAKGVPE 
AAIFCDYAGF STLDSVVRAR KVFGERRITI ISQAFHNQRA IWLAQQYGID AIGVNAPDLN 
KRHGTYTRLR EKLARVSAVL DAKILHRQPK YLGAGVTIGA DSAHGCPSRQ