Gene SeD_A3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3576 
Symbol 
ID6875125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3433304 
End bp3435322 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content59% 
IMG OID642786564 
ProductFAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein 
Protein accessionYP_002217200 
Protein GI198244260 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.265601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC CATCGCTGTT CGCCCCGCTC GATCTGGGCT TTACTACTCT CAGAAACCGC 
GTGCTGATGG GATCGATGCA CACGGGTCTG GAAGAACATC CTGATGGCGC CGAGCGCCTG
GCGGCATTTT ATGCCGAGCG CGCGCGACAC GGCGTAGCGT TAATCGTCAC CGGCGGTATT
GCGCCCGTTC CCTCCGGGGT CGTGATGACC GGCGGCGCGA TGCTGAACGA CGCCAGCCAA
TTAACGCCTC ACCGCGTGGT GACCGATGCC GTACATGCGC AAGGCGGTAA AATCGCGCTG
CAAATTCTGC ACACCGGACG TTACAGCTAT CAGCCGCACC TGGTCGCGCC GTCGGCAATT
CAGGCGCCAA TCAACCGCTT TATGCCGCAT GAACTGACGC ATGATGAAAT CTTGCAGTTA
ATCGACGACT TCGCGCATTG CGCGCAACTG GCGCGGGAAG CAGGCTACGA CGGCGTAGAG
GTGATGGGAT CAGAGGGCTA TCTGATTAAT GAATTTCTCA CCCGGCGAAC TAACCATCGC
GATGACGAGT GGGGCGGCGA CTATACCAGC CGTATGCGCT TCGCGGTTGA GGTAGTACGC
GCGGTACGCC AGCGGGTAGG GAACGACTTT ATTATTATCT ATCGCCTGTC GATGCTCGAT
CTGGTGGAAA ATGGCGGCAC GTTCGACGAA ACGGTACAAC TGGCGCAAGC CATTGAAGCC
GCAGGCGCAA GCCTAATTAA TACCGGCATT GGCTGGCATG AGGCGCGAAT CCCGACCATC
GCCACGCCAG TACCGCGTGG CGCCTTTAGC TGGGTGACGC GGAAACTCAA AGGTCATGTG
TCGGTTCCGC TGATCGCGAC CAATCGCATT AACGATCCGC AGGTCGCCGA GACGATCCTG
ACGCGCGGCG ATGCCGATAT GGTGTCGATG GCGCGTCCCT TCCTTGCCGA TGCCGAATTC
CTGACTAAAG CGCAATCCGG ACGCGCAGAT GAGATCAACA CCTGTATCGG CTGTAATCAG
GCCTGTCTGG ATCGGATCTT CATCGGCAAA GTGACCTCCT GTCTGGTGAA CCCACGCGCC
TGTCACGAAA CCCACATGCC GATAGCGCCG GCCATACGCA AAAAGAATCT GGCCGTTGTC
GGCGCAGGCC CGGCGGGGCT GGCTTTCGCG ATTAACGCCG CGTCGCGCGG CCATCATGTC
ACGCTGTTTG ACGCCCAGAG TGAAATTGGC GGCCAGTTTA CTATCGCCAG GCAGATCCCG
GGTAAAGAGG AGTTTTACGA AACGCTGCGC TACTACCGTC GAATGATCGA TGTTACTGGC
GTTACGCTGA AACTGAGCCA ACGGGTGAAC GCAGAGGATC TTCAGCCGTT TGACGAAGCG
ATCCTCGCCT GCGGAATAGT ACCGCGCCGC CCGCCGATAG ACGGTATCGA TCATCCAAAA
GTATTGACCT ACCTGGAGGT ATTGCGCGAT AAAGCGCCGG TTGGTAAGCG AGTGGCGATC
ATTGGCTGCG GCGGGATCGG TTTTGACACG GCCATGTATC TGAGCCAGCA TGGCGAATCC
ACCAGCCAAA ATATTGCTGA ATTTTGTACG GAATGGGGAA TTGATACCAG CCTGCAACAG
GCAGGCGGTC TGCGCCCGGA AGGCCCGCGC CTGGCACGTA GTCCACGGCA AATCGTCATG
CTGCAACGCA AAGCCAGCAA GCCGGGCGAA GGGTTAGGTA AAACCACCGG CTGGATCCAT
CGCGCGACGT TACTGGCGCG CGGCGTGAAG ATGATCCCGG CGGTCAGTTA CCAGAAGATC
GACGACGACG GATTACATCT CTTGATCGGC GGCGAACCGC AGTTGCTGGA AGTGGATCAT
GTGGTGATCT GCGCCGGACA GGAACCTCGC CGCGAGCTGG CGGACCCGTT ACGCGCCGCA
GGTAAAACGG TACATCTTAT CGGCGGATGC GATGTCGCGA TGGAGCTGGA TGCCCGACGG
GCGATTGCCC AGGGCATCCG ACTGGCGCTG GAGATTTAA
 
Protein sequence
MSYPSLFAPL DLGFTTLRNR VLMGSMHTGL EEHPDGAERL AAFYAERARH GVALIVTGGI 
APVPSGVVMT GGAMLNDASQ LTPHRVVTDA VHAQGGKIAL QILHTGRYSY QPHLVAPSAI
QAPINRFMPH ELTHDEILQL IDDFAHCAQL AREAGYDGVE VMGSEGYLIN EFLTRRTNHR
DDEWGGDYTS RMRFAVEVVR AVRQRVGNDF IIIYRLSMLD LVENGGTFDE TVQLAQAIEA
AGASLINTGI GWHEARIPTI ATPVPRGAFS WVTRKLKGHV SVPLIATNRI NDPQVAETIL
TRGDADMVSM ARPFLADAEF LTKAQSGRAD EINTCIGCNQ ACLDRIFIGK VTSCLVNPRA
CHETHMPIAP AIRKKNLAVV GAGPAGLAFA INAASRGHHV TLFDAQSEIG GQFTIARQIP
GKEEFYETLR YYRRMIDVTG VTLKLSQRVN AEDLQPFDEA ILACGIVPRR PPIDGIDHPK
VLTYLEVLRD KAPVGKRVAI IGCGGIGFDT AMYLSQHGES TSQNIAEFCT EWGIDTSLQQ
AGGLRPEGPR LARSPRQIVM LQRKASKPGE GLGKTTGWIH RATLLARGVK MIPAVSYQKI
DDDGLHLLIG GEPQLLEVDH VVICAGQEPR RELADPLRAA GKTVHLIGGC DVAMELDARR
AIAQGIRLAL EI