Gene SeD_A3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3568 
Symbol 
ID6871740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3425419 
End bp3425925 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content52% 
IMG OID642786556 
ProductG/U mismatch-specific DNA glycosylase 
Protein accessionYP_002217193 
Protein GI198245603 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.331488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAGG ACATACTGGC GCCAGGGCTA CGGGTGGTTT TTTGCGGCAT CAATCCGGGA 
CTCTCCTCGG CGAATACCGG CTTTCCGTTT GCACATCCCG CGAATCGTTT TTGGAAAGTT
ATTCATTTGG CCGGTTTCAC CGATCGACAG TTGAAACCGG AAGAGGCGGA AAAATTACTG
GATTTTCGCT GCGGGGTAAC GAAACTCGTC GATCGACCGA CGGTACAAGC GACTGAGGTG
AAGTTGCATG AATTACGTAG CGGCGGACGC AACCTGATTG AAAAAATAGA GGACTACCAG
CCCGCAGCGC TGGCGGTGCT TGGTAAACAG GCTTTTGAAC AGGGATTCAG CCAGCGTGGT
ATCGCCTGGG GTAAACAAAA GATCGCCATT GGCGCGACGA TGGTGTGGGT GTTGCCGAAT
CCCAGTGGCT TAAACCGAAT TAAAACGGAA AAACTGGTCG AGGCCTATCG CGAACTGGAT
CAAGCGCTCA TTATGAGTGG GCTATAG
 
Protein sequence
MVKDILAPGL RVVFCGINPG LSSANTGFPF AHPANRFWKV IHLAGFTDRQ LKPEEAEKLL 
DFRCGVTKLV DRPTVQATEV KLHELRSGGR NLIEKIEDYQ PAALAVLGKQ AFEQGFSQRG
IAWGKQKIAI GATMVWVLPN PSGLNRIKTE KLVEAYRELD QALIMSGL