Gene SeD_A3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3563 
Symbol 
ID6874763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3419001 
End bp3419612 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID642786551 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionYP_002217188 
Protein GI198244679 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.299047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.098829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA TCGCGCCTGG AATGATCCTC TTCGCGTACC TCTGCGGCTC AATTTCCAGT 
GCCATTCTGG TTTGCCGCAT CGCCGGGCTG CCCGATCCGC GAGAAAGCGG CTCCGGCAAC
CCGGGCGCGA CGAACGTATT ACGAATCGGT GGCAAGGGAG CGGCTGTCGC GGTACTTATT
TTTGACATCC TTAAAGGCAT GTTGCCCGTC TGGGGCGCGT ATGCGTTAGG CGTTACCCCT
TTCTGGCTGG GGCTTATCGC TATCGCCGCC TGTCTGGGGC ATATCTGGCC GGTCTTTTTT
GGCTTTAAAG GCGGGAAAGG CGTAGCAACC GCGTTTGGCG CCATTGCGCC CATCGGCTGG
GATTTAACCG GCGTCATGGC TGGCACCTGG CTGCTGACGG TCCTGTTAAG CGGTTATTCA
TCGTTAGGGG CGATTGTCAG CGCCTTGATT GCGCCGTTTT ACGTCTGGTG GTTTAAACCG
CAGTTCACCT TCCCGGTATC GATGCTGTCA TGTCTCATTT TGCTGCGCCA TCATGACAAC
ATCCAGCGTC TGTGGCGTCG CCAGGAGACG AAAATCTGGA CGAAGCTGAA AAAGAAACGC
CAGAAAGATT GA
 
Protein sequence
MSAIAPGMIL FAYLCGSISS AILVCRIAGL PDPRESGSGN PGATNVLRIG GKGAAVAVLI 
FDILKGMLPV WGAYALGVTP FWLGLIAIAA CLGHIWPVFF GFKGGKGVAT AFGAIAPIGW
DLTGVMAGTW LLTVLLSGYS SLGAIVSALI APFYVWWFKP QFTFPVSMLS CLILLRHHDN
IQRLWRRQET KIWTKLKKKR QKD