Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3560 |
Symbol | cca |
ID | 6872038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3416271 |
End bp | 3417512 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642786548 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_002217185 |
Protein GI | 198241760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.173114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGATTT ATCTGGTCGG TGGTGCGGTT CGGGATGCGT TGTTAGGGCT ACCGGTTAAA GATAAAGATT GGGTCGTTGT CGGCGCCACG CCGCAGGAGA TGCTTGATGC GGGCTACCAG CAGGTAGGCC GTGATTTTCC TGTGTTTCTC CACCCGCAAA CTCACGAAGA ATATGCGCTG GCGCGTACCG AGCGTAAATC CGGTTCCGGC TACACGGGCT TCACCTGTTA TGCCGCGCCG GACGTTACCC TGGAAGCCGA CCTCCAGCGT CGCGATCTGA CCATTAATGC TCTGGCGCGC GACGATGACG GCCAGATTAT CGACCCTTAC CACGGGCGCC GGGATCTGGA GGCGCGTCTA CTGCGACATG TCTCTCCCGC GTTTGGCGAA GATCCCTTGC GCGTATTGCG CGTGGCGCGT TTTGCCGCCC GTTACGCTCA TCTTAGTTTC CGTATCGCCG ATGAAACACT GGCGCTAATG CGCGAAATGA CCGCGGCAGG CGAGCTGGAA CATCTGACGC CGGAACGGGT ATGGAAAGAG ACGGAAAATG CGCTTACCAC CCGTAATCCG CAGGTTTACT TCCAGGTATT GCGCGACTGC GGCGCCCTGC GCGTCCTGTT TCCGGAAATC GACGCCCTGT TTGGCGTACC CGCGCCGGCA AAGTGGCATC CGGAAATTGA TACCGGAGTT CATACGTTGA TGACGCTGTC GATGGCCGCC ATGCTCAGTC CGCAGCTTGA TGTTCGTTTC GCCACGCTTT GTCATGACCT GGGCAAAGGC TTAACGCCGA AAAACCTCTG GCCGCGCCAT CATGGCCACG GCCCGGCGGG CGTGAAACTG GTCGAACAGC TATGCCAGCG TTTGCGCGTC CCCAATGACC TACGTGATTT AGCTAAACTG GTCGCCGAGT ACCATGATCT GATCCACACC TTTCCGATAC TCCAGCCGAA AACGATCGTT AAGCTGTTTG ACGCCATTGA TGCATGGCGT AAACCGCAGC GCGTCGAGCA GATTGCGCTG ACCAGCGAAG CCGATGTCCG TGGACGTACC GGCTTTGAAG CGTCGGATTA CCCGCAGGGG CGCTGGCTGC GCGAAGCCTG GCAGGTGGCC CAAGCGGTAC CGACGAAAGA GGTGGTGGAG GCCGGATTTA AGGGCATTGA GATTCGCGAG GAGCTGACGA AGCGACGAAT TGCAGCGGTC GCCAACTGGA AAGAGAAGCG CTGCCCGAAC CCCGCCAGCT AA
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Protein sequence | MKIYLVGGAV RDALLGLPVK DKDWVVVGAT PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL ARTERKSGSG YTGFTCYAAP DVTLEADLQR RDLTINALAR DDDGQIIDPY HGRRDLEARL LRHVSPAFGE DPLRVLRVAR FAARYAHLSF RIADETLALM REMTAAGELE HLTPERVWKE TENALTTRNP QVYFQVLRDC GALRVLFPEI DALFGVPAPA KWHPEIDTGV HTLMTLSMAA MLSPQLDVRF ATLCHDLGKG LTPKNLWPRH HGHGPAGVKL VEQLCQRLRV PNDLRDLAKL VAEYHDLIHT FPILQPKTIV KLFDAIDAWR KPQRVEQIAL TSEADVRGRT GFEASDYPQG RWLREAWQVA QAVPTKEVVE AGFKGIEIRE ELTKRRIAAV ANWKEKRCPN PAS
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