Gene SeD_A3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3560 
Symbolcca 
ID6872038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3416271 
End bp3417512 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID642786548 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_002217185 
Protein GI198241760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.173114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTT ATCTGGTCGG TGGTGCGGTT CGGGATGCGT TGTTAGGGCT ACCGGTTAAA 
GATAAAGATT GGGTCGTTGT CGGCGCCACG CCGCAGGAGA TGCTTGATGC GGGCTACCAG
CAGGTAGGCC GTGATTTTCC TGTGTTTCTC CACCCGCAAA CTCACGAAGA ATATGCGCTG
GCGCGTACCG AGCGTAAATC CGGTTCCGGC TACACGGGCT TCACCTGTTA TGCCGCGCCG
GACGTTACCC TGGAAGCCGA CCTCCAGCGT CGCGATCTGA CCATTAATGC TCTGGCGCGC
GACGATGACG GCCAGATTAT CGACCCTTAC CACGGGCGCC GGGATCTGGA GGCGCGTCTA
CTGCGACATG TCTCTCCCGC GTTTGGCGAA GATCCCTTGC GCGTATTGCG CGTGGCGCGT
TTTGCCGCCC GTTACGCTCA TCTTAGTTTC CGTATCGCCG ATGAAACACT GGCGCTAATG
CGCGAAATGA CCGCGGCAGG CGAGCTGGAA CATCTGACGC CGGAACGGGT ATGGAAAGAG
ACGGAAAATG CGCTTACCAC CCGTAATCCG CAGGTTTACT TCCAGGTATT GCGCGACTGC
GGCGCCCTGC GCGTCCTGTT TCCGGAAATC GACGCCCTGT TTGGCGTACC CGCGCCGGCA
AAGTGGCATC CGGAAATTGA TACCGGAGTT CATACGTTGA TGACGCTGTC GATGGCCGCC
ATGCTCAGTC CGCAGCTTGA TGTTCGTTTC GCCACGCTTT GTCATGACCT GGGCAAAGGC
TTAACGCCGA AAAACCTCTG GCCGCGCCAT CATGGCCACG GCCCGGCGGG CGTGAAACTG
GTCGAACAGC TATGCCAGCG TTTGCGCGTC CCCAATGACC TACGTGATTT AGCTAAACTG
GTCGCCGAGT ACCATGATCT GATCCACACC TTTCCGATAC TCCAGCCGAA AACGATCGTT
AAGCTGTTTG ACGCCATTGA TGCATGGCGT AAACCGCAGC GCGTCGAGCA GATTGCGCTG
ACCAGCGAAG CCGATGTCCG TGGACGTACC GGCTTTGAAG CGTCGGATTA CCCGCAGGGG
CGCTGGCTGC GCGAAGCCTG GCAGGTGGCC CAAGCGGTAC CGACGAAAGA GGTGGTGGAG
GCCGGATTTA AGGGCATTGA GATTCGCGAG GAGCTGACGA AGCGACGAAT TGCAGCGGTC
GCCAACTGGA AAGAGAAGCG CTGCCCGAAC CCCGCCAGCT AA
 
Protein sequence
MKIYLVGGAV RDALLGLPVK DKDWVVVGAT PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL 
ARTERKSGSG YTGFTCYAAP DVTLEADLQR RDLTINALAR DDDGQIIDPY HGRRDLEARL
LRHVSPAFGE DPLRVLRVAR FAARYAHLSF RIADETLALM REMTAAGELE HLTPERVWKE
TENALTTRNP QVYFQVLRDC GALRVLFPEI DALFGVPAPA KWHPEIDTGV HTLMTLSMAA
MLSPQLDVRF ATLCHDLGKG LTPKNLWPRH HGHGPAGVKL VEQLCQRLRV PNDLRDLAKL
VAEYHDLIHT FPILQPKTIV KLFDAIDAWR KPQRVEQIAL TSEADVRGRT GFEASDYPQG
RWLREAWQVA QAVPTKEVVE AGFKGIEIRE ELTKRRIAAV ANWKEKRCPN PAS