Gene SeD_A3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3558 
Symbol 
ID6873152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3414051 
End bp3415352 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content55% 
IMG OID642786546 
Productadenylate cyclase 
Protein accessionYP_002217183 
Protein GI198243293 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.574554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.228439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG AAATCGAATT AAAGTTTATC GTCAATCACG ACGCCGTAGA TGCGCTGCGA 
AATCATCTTC ATACGCTCGG CGGCGAGCAT CATGCGCCCA GCCAGTTGCT GAATATCTAC 
TTCGAAACGC CTGATAACTG GCTACGCCGC CATGATATGG GGCTGCGTAT TCGTGGTGAA 
AATGGGCGCT ATGAAATGAC CATGAAAATT GCCGGCCGGG TAACGGGCGG GCTGCACCAG 
CGACCCGAAT ACAATGTCGC GCTAAGCGAA CCCGTGCTGG ATCTGACGCA ACTTCCGGCG 
GAGGTCTGGC CGGATGGTAA CCTGCCCGCC GGCCTGGCAT CAAGCGTACA GCCGCTGTTC 
AGTACCGATT TTTACCGGGA AAAATGGTGT CTGGACGTTG ATGGCAGCAG GATTGAAATT 
GCGCTCGATC TCGGCGACGT AAAAGCGGGC GAGTTTGCCG AACCGATTTG TGAGCTGGAG 
CTTGAGTTGC TTCGCGGCGA TACGCGCGCC GTGTTAAAAC TGGCGAAGCA ACTGCTGTCG 
CAAACCGGTT TGCGTCAGGG CAGTCTGAGT AAGGCGGCGC GAGGTTATCA CCTGGCGCAG 
GGGAATGCGC CGCGAGAGAA TACACCAACG GCAATTCTGC GGACTGCCGC GAAAGCCACG 
GTAGAGCAAG GGCTGGAGGT CTCGCTGGAT CTGGCGTTGT CACAGTGGCA GTACCATGAA 
GAGCTCTGGC TGCGCGGCGA CGAGTCGGCG GAAGAACATG TGCTGGATGC TATGGGATTA 
GTGCGCCATG CCTTAATGCT TTTTGGCGGC ATTGTTCCAC GTAAAGCGAG CGCTCACTTA 
CGTGATCTAC TTACCCAGGC GGAAGCGACG ATGACATCCG CGGTGTCCGC CGTCACAGCC 
GTTTATAGTA CGCAAACGGC GATGGCGAAA CTGGCATTGA CGGAATGGCT GGTGACGAAA 
GCCTGGCAGC CATTTCTGGA CGCGAAGGCG CAGGCCAAAA TGGCCGATTC TTTTAAGCGT 
TTCGCCGACA TTCATCTTTC TCGTCATGCT GCTGAATTAA AAAAAGTTTT TGGACAACCG 
CTGGGTGATA AGTATCGCGA CCAGTTGCCG CGTTTGACTC GCGATATCGA CAGCGTTTTA 
CTGCTGGCCG GGTATTATGA TGCGACGGTC GCGCAGGCAT GGCTGGAAAA CTGGCAGGGA 
TTGCGTCACG CCATTCTTAC CGGACAACGT ATTGAAATTG AACATTTCCG TAATGAGGCC 
ATTAACCAGC AGCCGTTCTG GTTGCACAGC GGAAAACGAT AA
 
Protein sequence
MAQEIELKFI VNHDAVDALR NHLHTLGGEH HAPSQLLNIY FETPDNWLRR HDMGLRIRGE 
NGRYEMTMKI AGRVTGGLHQ RPEYNVALSE PVLDLTQLPA EVWPDGNLPA GLASSVQPLF 
STDFYREKWC LDVDGSRIEI ALDLGDVKAG EFAEPICELE LELLRGDTRA VLKLAKQLLS 
QTGLRQGSLS KAARGYHLAQ GNAPRENTPT AILRTAAKAT VEQGLEVSLD LALSQWQYHE 
ELWLRGDESA EEHVLDAMGL VRHALMLFGG IVPRKASAHL RDLLTQAEAT MTSAVSAVTA 
VYSTQTAMAK LALTEWLVTK AWQPFLDAKA QAKMADSFKR FADIHLSRHA AELKKVFGQP 
LGDKYRDQLP RLTRDIDSVL LLAGYYDATV AQAWLENWQG LRHAILTGQR IEIEHFRNEA 
INQQPFWLHS GKR