Gene SeD_A3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3550 
Symbol 
ID6875537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3405994 
End bp3406290 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content53% 
IMG OID642786539 
Producthypothetical protein 
Protein accessionYP_002217176 
Protein GI198243182 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.117116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.856827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC CGAAAAAAAT TGAGCAAATC GCACGCCAGG TTCATGAGTC AATGCCGAAA 
GGTATTCGCG AGTTCGGGGA AGATATCGAG AAAAAAATCC GTCAAACGCT GCAATCTCAG 
CTGACGCGTC TCGATCTGGT GAGCCGCGAA GAGTTTGATG TCCAGACTCA GGTCTTGCTG 
CGCACCCGGG AAAAACTGGC GCTGCTGGAG CAACGCCTCA GCGAACTGGA AGCTCGCGAC 
AAGCCTGAAG AAGTAAAACC TGCGCCCGCC ATCCCGCCAG TCGATCCACA AGAGTAA
 
Protein sequence
MIDPKKIEQI ARQVHESMPK GIREFGEDIE KKIRQTLQSQ LTRLDLVSRE EFDVQTQVLL 
RTREKLALLE QRLSELEARD KPEEVKPAPA IPPVDPQE