Gene SeD_A3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3536 
Symbolicc 
ID6872617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3393515 
End bp3394342 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content56% 
IMG OID642786526 
Productcyclic 3',5'-adenosine monophosphate phosphodiesterase 
Protein accessionYP_002217163 
Protein GI198242752 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.337997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAGCC TGTTAACCCT ACCTCTGGCT GGTGAGGCCC GAGTCAGGAT TTTACAAATT 
ACAGATACTC ACCTGTTTGC CGAAAAGCAT GAAACGCTGT TAGGCGTCAA TACCTGGGAA
AGTTACCAGG CCGTGCTGGA GGCTATTCGG GCGCAACAGT ATGAATATGA TCTGATCGTG
GCCACCGGCG ATCTGGCGCA GGATCAATCC GCTGCGGCTT ATCAGCATTT TGCTGAGGGT
ATCGCAAGCT TTCGCGCGCC TTGCGTTTGG CTACCGGGCA ATCATGATTT TCAGCCGGCA
ATGTACAGCG CGCTGCAAGA GGCGGGGATT TCCCCGGCTA AACGCGTGTT AATCGGTGAA
CAATGGCAGA TTTTGTTGCT GGATAGCCAG GTGTTTGGCG TCCCGCATGG CGAACTGAGC
GAGTTCCAAC TGGAATGGCT TGAGCGTAAG CTCGCCGATG CGCCAGAGAG ACAGACATTG
CTCCTGTTGC ACCACCATCC GTTGCCGGCA GGGTGCAGTT GGCTGGATCA GCACAGCTTG
CGTAATGCTG GTGAGCTGGA TAGCGTGCTG GCGAATTTCC CGCGTGTAAA GTATCTGCTA
TGCGGACATA TTCACCAGGA GCTGGATCTC GACTGGAACG GACGGCGTCT GCTGGCGTCG
CCGTCAACCT GCGTACAGTT CAAACCGCAC TGCGCGAACT TTACGCTGGA TACTATCGCG
CCGGGCTGGC GTACGCTGGA GCTCCAGGCG AACGGCGTCC TGGAGACGGA AGTGCATCGC
CTGCAGGATA CCCGGTTCCG ACCCGATACC GCTTCGGAAG GATACTGA
 
Protein sequence
MESLLTLPLA GEARVRILQI TDTHLFAEKH ETLLGVNTWE SYQAVLEAIR AQQYEYDLIV 
ATGDLAQDQS AAAYQHFAEG IASFRAPCVW LPGNHDFQPA MYSALQEAGI SPAKRVLIGE
QWQILLLDSQ VFGVPHGELS EFQLEWLERK LADAPERQTL LLLHHHPLPA GCSWLDQHSL
RNAGELDSVL ANFPRVKYLL CGHIHQELDL DWNGRRLLAS PSTCVQFKPH CANFTLDTIA
PGWRTLELQA NGVLETEVHR LQDTRFRPDT ASEGY