| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3525 |
|---|
| Symbol | parC |
|---|
| ID | 6872736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3383999 |
|---|
| End bp | 3386257 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642786515 |
|---|
| Product | DNA topoisomerase IV subunit A |
|---|
| Protein accession | YP_002217152 |
|---|
| Protein GI | 198242763 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TGGCAGAGCG CCTTGCGCTA CATGAATTTA CGGAAAACGC CTACTTAAAC
TACTCCATGT ACGTGATCAT GGATCGTGCG TTGCCGTTTA TTGGCGACGG CCTGAAGCCG
GTACAGCGCC GCATCGTCTA TGCGATGTCA GAGCTGGGGC TGAACGCCAC CGCTAAATTT
AAAAAATCCG CCCGTACCGT TGGTGACGTA CTGGGTAAGT ATCACCCGCA TGGCGACAGC
GCCTGCTATG AAGCCATGGT GCTGATGGCG CAGCCGTTCT CTTACCGTTA CCCGCTGGTC
GATGGCCAGG GGAACTGGGG CGCGCCGGAT GATCCGAAGT CATTCGCGGC GATGCGTTAT
ACCGAATCCC GCCTGTCCAA ATACGCCGAG CTGCTGTTAA GCGAACTCGG TCAGGGGACG
GCGGACTGGG TGCCAAACTT CGACGGCACC ATGCAGGAAC CGAAAATGTT ACCGGCGCGT
CTGCCGAACA TCCTGCTGAA CGGCACCACC GGTATTGCGG TGGGCATGGC AACAGATATT
CCGCCGCATA ACCTGCGCGA AGTGGCGAAA GCGGCGATTA CGCTGATTGA GCAGCCGAAA
ACGACGCTGG ATCAGTTGCT GGATATCGTC CAGGGGCCGG ATTACCCGAC CGAAGCGGAG
ATCATTACCC CTCGTGCGGA AATTCGTAAA ATTTACGAAA ATGGGCGTGG CTCCGTGCGT
ATGCGCGCGG TATGGACCAA AGAAGACGGC GCCGTGGTGA TCACCGCGTT GCCGCATCAG
GTATCTGGCG CAAAAGTGCT GGAGCAGATT GCTGCGCAGA TGCGCAATAA AAAACTGCCG
ATGGTGGACG ACCTGCGCGA TGAATCGGAT CACGAAAACC CGACGCGTTT AGTGATTGTC
CCGCGCTCCA ACCGTGTGGA TATGGAGCAG GTGATGAACC ATCTGTTCGC CACCACCGAT
CTGGAAAAAA GCTACCGTAT TAACCTGAAC ATGATCGGTC TGGATGGTCG TCCGGCGGTG
AAAAACCTGC TGGAGATCCT CACCGAGTGG CTGGCGTTCC GCCGCGACAC GGTGCGCCGT
CGTCTGAACT ATCGTCTGGA GAAAGTGCTT AAGCGCCTGC ATATCCTCGA AGGTTTGCTG
GTGGCGTTTC TCAACATCGA TGAAGTGATC GAGATTATCC GTAACGAGGA TGAGCCGAAA
CCCGCGCTGA TGTCGCGTTT CGGCATCAGC GAAACCCAGG CGGAAGCGAT TCTCGAACTG
AAACTGCGTC ATCTCGCCAA ACTGGAAGAG ATGAAAATTC GCGGCGAGCA GGACGAGCTG
GAAAAAGAGC GTGACCAGTT GCAGGGCATT CTCGCGTCCG AACGCAAAAT GAATACCTTG
CTGAAAAAAG AGCTACAGGC AGATTCCGAT GCCTATGGCG ACGATCGCCG TTCTCCGCTG
CGTGAGCGCG AAGAAGCTAA AGCGATGAGC GAACACGACA TGCTGCCGTC CGAACCGGTG
ACTATCGTGC TGTCGCAGAT GGGCTGGGTG CGCAGCGCCA AAGGTCATGA TATTGATGCG
CCGGGGCTTA ACTATAAAGC GGGCGACAGC TTTAAAGCCG CGGTGAAAGG TAAGAGTAAT
CAACCGGTGG TGTTTATTGA TACCACCGGG CGCAGCTATG CTATTGATCC CATTACGCTT
CCGTCGGCGC GTGGGCAGGG CGAGCCGCTG ACCGGCAAAC TCACGCTGCC GCCGGGGGCG
ACCGTAGAGC ATATGCTGAT GGAAGGCGAT GACCAGAAAC TGCTGATGGC GTCGGATGCG
GGCTACGGCT TCGTTTGTAC GTTTAACGAT CTGGTTGCCC GTAACCGTGC CGGTAAGGCG
TTGATTACAC TGCCGGAAAA TGCGCACGTC ATGCCGCCGC TGGTGATTGA AGACGAGCAC
GATATGCTGC TGGCGATTAC CCTGGCCGGA CGGATGTTGA TGTTCCCGGT AGACTCTCTG
CCGCAGCTGT CGAAAGGCAA AGGGAATAAG ATCATTAATA TCCCCTCTGC AGAAGCGGCG
AAAGGCGATG ATGGACTGGC GCACCTGTAC GTGCTGCCGC CACAAAGCAC TCTGACTATC
CATGTCGGGA AGCGCAAAAT CAAACTGCGC CCTGAAGAGT TACAAAAGGT AGTCGGTGAA
CGCGGACGCC GTGGCACATT AATGCGCGGC CTGCAGCGTA TCGATCGCAT TGAGATTGAT
TCGCCGCATC GCGTAAGTCA TGGCGACAGC GAAGAGTAA
|
|---|
| Protein sequence | MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNATAKF
KKSARTVGDV LGKYHPHGDS ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY
TESRLSKYAE LLLSELGQGT ADWVPNFDGT MQEPKMLPAR LPNILLNGTT GIAVGMATDI
PPHNLREVAK AAITLIEQPK TTLDQLLDIV QGPDYPTEAE IITPRAEIRK IYENGRGSVR
MRAVWTKEDG AVVITALPHQ VSGAKVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV
PRSNRVDMEQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILTEW LAFRRDTVRR
RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGIS ETQAEAILEL
KLRHLAKLEE MKIRGEQDEL EKERDQLQGI LASERKMNTL LKKELQADSD AYGDDRRSPL
REREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN
QPVVFIDTTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVEHMLMEGD DQKLLMASDA
GYGFVCTFND LVARNRAGKA LITLPENAHV MPPLVIEDEH DMLLAITLAG RMLMFPVDSL
PQLSKGKGNK IINIPSAEAA KGDDGLAHLY VLPPQSTLTI HVGKRKIKLR PEELQKVVGE
RGRRGTLMRG LQRIDRIEID SPHRVSHGDS EE
|
|---|
| |