Gene SeD_A3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3523 
Symbol 
ID6874302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3381519 
End bp3382931 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content59% 
IMG OID642786513 
Productrepressor protein for FtsI 
Protein accessionYP_002217150 
Protein GI198243162 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCA GTCGGCGTCA GTTTCTTCAG GCATCGGGAA TCGCACTATG TGCAGGCGCG 
ATTCCCCTCA GGGCGAATGC TGCCGGTCAG CAACAGCCGT TGCCTGTTCC GCCGTTGCTG
GAGTCCCGTC GCGGGCAGCC GTTGTTTATG ACGCTACAGC GAGCGCACTG GTCCTTTACG
CAAGGCACGC GCGCGCCGGT CTGGGGAGTG AACGGTCGTT ATCTGGGGCC GACAATCCGC
GTCTGGAAAG GCGATGACGT TAAACTCATC TATAGCAACC GCCTGGCGGA AAATGTCTCC
ATGACGGTTG CTGGTTTACT GGTGCCGGGG CCGCTGATGG GTGGCCCGGC GCGTATGATG
TCGCCGAACG CGGACTGGGC GCCGGTGTTG CCGATTCGTC AGAGCGCCGC GACGCTGTGG
TATCACGCTA ACACGCCTAA CCGCACTGCG CAGCAGGTGT ATAACGGCCT GGCCGGAATG
TGGCTGGTCG AAGACGACAT TAGTAAAACG CTGCCCATTC CGAACCATTA CGGCGTGGAT
GATTTTCCCG TCATTATCCA GGATAAACGG CTGGATAACT TTGGGACGCC GGAGTACAGC
GAACCGGGAA GCGGTGGTTT TGTCGGCGAT ACGCTGCTGG TGAACGGCGC GCAAAGCCCC
TATGTCGAAG TGTCCCGCGG CTGGGTGCGG TTACGGTTGT TGAACGCCTC GAACTCGCGG
CGCTATCAGC TTCAGATGAG CGATGGCCGG GCGCTGCATG TGATTTCAGG CGATCAGGGC
TTTTTACCTG CGCCGGTTTC CGTCAAACAG TTGTCACTGG CGCCCGGCGA GCGACGTGAA
ATCCTGGTTG ATATGACCAA CGGCGACGAA GTCTCGATCA CCTGCGGGGA AGCGGCCAGC
ATAGTCGATC GGATTCGCGG TTTCTTTGAG CCTTCCAGTA TTCTGGTTTC GACCCTGGTG
CTGACGTTAC GGCCAACCGG ATTGCTGCCG CTGGTGACCG ATAATCTGTC GATGCGTCTG
TTGCCGACGG AGATCATGAG CGGCGCGCCT GTCCGCAGTC GGGACATCAG TCTTGGCGAC
GATCCGGGGA TTAACGGCCA ACTGTGGGAT GTGAATCGCA TTGATATTAC CGCCCAACAA
GGCACCTGGG AGCGCTGGAC GGTACGCGCC GATATGCCGC AGTCGTTCCA TATTGAGGGC
GTCTCTTTCC TGATTCGTAA CGTCAACGGC GCTATGCCGT TCCCGGAAGA TAGAGGCTGG
AAAGATACCG TCTGGGTGGA TGGGCAAGTC GAATTGCTGC TCTATTACGG TCAGCCGTCC
TGGCCGCACT TCCCGTTCTA TTTCAACAGC CAGACGCTGG AAATGGCTGA CCGCGGCTCG
ATTGGGCAAA TGCTGGTGAA TCCGGCGTCG TAA
 
Protein sequence
MSFSRRQFLQ ASGIALCAGA IPLRANAAGQ QQPLPVPPLL ESRRGQPLFM TLQRAHWSFT 
QGTRAPVWGV NGRYLGPTIR VWKGDDVKLI YSNRLAENVS MTVAGLLVPG PLMGGPARMM
SPNADWAPVL PIRQSAATLW YHANTPNRTA QQVYNGLAGM WLVEDDISKT LPIPNHYGVD
DFPVIIQDKR LDNFGTPEYS EPGSGGFVGD TLLVNGAQSP YVEVSRGWVR LRLLNASNSR
RYQLQMSDGR ALHVISGDQG FLPAPVSVKQ LSLAPGERRE ILVDMTNGDE VSITCGEAAS
IVDRIRGFFE PSSILVSTLV LTLRPTGLLP LVTDNLSMRL LPTEIMSGAP VRSRDISLGD
DPGINGQLWD VNRIDITAQQ GTWERWTVRA DMPQSFHIEG VSFLIRNVNG AMPFPEDRGW
KDTVWVDGQV ELLLYYGQPS WPHFPFYFNS QTLEMADRGS IGQMLVNPAS