Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3506 |
Symbol | |
ID | 6873369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3365631 |
End bp | 3366515 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786498 |
Product | oxidoreductase |
Protein accession | YP_002217135 |
Protein GI | 198245615 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCATC TATACGACCC TACCACGCAG TATTACACCG GCGAATATCC TAAGCAAAAA CAGCCGGCGC CCGGCGTCCA GGCGAAAATG ACGCCTGTTC CTGACTGTGG CGAAAAAAGT TATGTCGGCA GTGGTCGCCT TAAAGATCGT AAGGCGCTGG TGACAGGGGG CGACTCCGGG ATTGGGCGCG CTGCCGCTAT CGCTTACGCG CGTGAAGGCG CAGATGTCGC GATCAACTAT CTGCCAGCGG AAGAAGAGGA CGCCCAGCAG GTTAAAGCGC TGATTGAGGA GTGCGGTCGT AAAGCGGTGT TATTGCCAGG CGATCTTAGC GACGAATCCT TCGCCCGTTC GCTGGTCCAT AAGGCGCGTG AAGCGCTGGG CGGGCTGGAC ATTCTGGCGC TGGTAGCCGG TAAACAGACG GCAATCCCGG AGATAAAAGA TCTGACCAGC GAGCAATTTC AGCAAACCTT CGCCGTTAAC GTTTTTGCCC TGTTCTGGAT AACCCAGGAA GCGATTCCGC TGCTGCCAAA AGGCGCCAGT ATTATCACGA CGTCGTCTAT CCAGGCGTAT CAGCCCAGTC CGCACCTGCT GGATTATGCG GCAACCAAGG CGGCAATCCT CAATTACAGC CGTGGCCTGG CGAAACAGGT GGCGGAAAAA GGAATTCGTG TGAATATTGT CGCGCCTGGC CCTATCTGGA CAGCGCTGCA AATTTCCGGC GGTCAAACCC AGGATAAAAT TCCGCAGTTT GGTCAGCAGA CGCCAATGAA GCGGGCCGGC CAACCGGCAG AGCTGGCGCC GGTGTATGTC TATCTGGCAA GCCAGGAATC CAGTTACGTT ACCGCAGAAG TGCACGGCGT GTGCGGCGGG GAGCATTTAG GCTAA
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Protein sequence | MSHLYDPTTQ YYTGEYPKQK QPAPGVQAKM TPVPDCGEKS YVGSGRLKDR KALVTGGDSG IGRAAAIAYA REGADVAINY LPAEEEDAQQ VKALIEECGR KAVLLPGDLS DESFARSLVH KAREALGGLD ILALVAGKQT AIPEIKDLTS EQFQQTFAVN VFALFWITQE AIPLLPKGAS IITTSSIQAY QPSPHLLDYA ATKAAILNYS RGLAKQVAEK GIRVNIVAPG PIWTALQISG GQTQDKIPQF GQQTPMKRAG QPAELAPVYV YLASQESSYV TAEVHGVCGG EHLG
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