Gene SeD_A3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3506 
Symbol 
ID6873369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3365631 
End bp3366515 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content57% 
IMG OID642786498 
Productoxidoreductase 
Protein accessionYP_002217135 
Protein GI198245615 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATC TATACGACCC TACCACGCAG TATTACACCG GCGAATATCC TAAGCAAAAA 
CAGCCGGCGC CCGGCGTCCA GGCGAAAATG ACGCCTGTTC CTGACTGTGG CGAAAAAAGT
TATGTCGGCA GTGGTCGCCT TAAAGATCGT AAGGCGCTGG TGACAGGGGG CGACTCCGGG
ATTGGGCGCG CTGCCGCTAT CGCTTACGCG CGTGAAGGCG CAGATGTCGC GATCAACTAT
CTGCCAGCGG AAGAAGAGGA CGCCCAGCAG GTTAAAGCGC TGATTGAGGA GTGCGGTCGT
AAAGCGGTGT TATTGCCAGG CGATCTTAGC GACGAATCCT TCGCCCGTTC GCTGGTCCAT
AAGGCGCGTG AAGCGCTGGG CGGGCTGGAC ATTCTGGCGC TGGTAGCCGG TAAACAGACG
GCAATCCCGG AGATAAAAGA TCTGACCAGC GAGCAATTTC AGCAAACCTT CGCCGTTAAC
GTTTTTGCCC TGTTCTGGAT AACCCAGGAA GCGATTCCGC TGCTGCCAAA AGGCGCCAGT
ATTATCACGA CGTCGTCTAT CCAGGCGTAT CAGCCCAGTC CGCACCTGCT GGATTATGCG
GCAACCAAGG CGGCAATCCT CAATTACAGC CGTGGCCTGG CGAAACAGGT GGCGGAAAAA
GGAATTCGTG TGAATATTGT CGCGCCTGGC CCTATCTGGA CAGCGCTGCA AATTTCCGGC
GGTCAAACCC AGGATAAAAT TCCGCAGTTT GGTCAGCAGA CGCCAATGAA GCGGGCCGGC
CAACCGGCAG AGCTGGCGCC GGTGTATGTC TATCTGGCAA GCCAGGAATC CAGTTACGTT
ACCGCAGAAG TGCACGGCGT GTGCGGCGGG GAGCATTTAG GCTAA
 
Protein sequence
MSHLYDPTTQ YYTGEYPKQK QPAPGVQAKM TPVPDCGEKS YVGSGRLKDR KALVTGGDSG 
IGRAAAIAYA REGADVAINY LPAEEEDAQQ VKALIEECGR KAVLLPGDLS DESFARSLVH
KAREALGGLD ILALVAGKQT AIPEIKDLTS EQFQQTFAVN VFALFWITQE AIPLLPKGAS
IITTSSIQAY QPSPHLLDYA ATKAAILNYS RGLAKQVAEK GIRVNIVAPG PIWTALQISG
GQTQDKIPQF GQQTPMKRAG QPAELAPVYV YLASQESSYV TAEVHGVCGG EHLG