Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3498 |
Symbol | hybO |
ID | 6875318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3359695 |
End bp | 3360813 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786490 |
Product | hydrogenase 2 small subunit |
Protein accession | YP_002217127 |
Protein GI | 198244463 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.271513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGGAG ATAATACTCT CATCACTTCT CACGGCATTA ACCGTCGTGA TTTCATGAAG CTTTGTGCAG CACTGGCCGC TACTATGGGG CTCAGTAGCA AAGCCGCCGC AGAAATGGCA GAATCGGTAT CCAATCCACA GCGTCCGCCC GTTATCTGGA TTGGCGCTCA GGAGTGTACC GGTTGTACCG AATCACTGCT TCGTGCTACA CACCCAACCG TTGAAAACCT CGTTCTGGAG ACTATCTCTC TGGAATACCA CGAGGTACTT TCCGCCGCAT TCGGTCACCA GGTCGAAGAA AACAAACATA ACGCTCTGGA GAAGTATAAA GGGCAATATG TTCTGGTGGT GGATGGTTCT ATCCCACTAA AAGATAACGG TATCTACTGC ATGGTTGCCG GCGAGCCGAT CGTGGATCAC ATCCGCAAAG CCGCTGACGG CGCAGCCGCG ATTATCGCTA TCGGTTCCTG CTCGGCATGG GGCGGCGTTG CTGCGGCTGG CGTAAACCCA ACCGGCGCTG TCAGTCTGCA GGAAGTCTTA CCGGGCAAAA CGGTTATCAA TATTCCAGGT TGTCCGCCAA ACCCGCATAA CTTCCTGGCG ACCGCCGCGC ATATCATCAC TTACGGCACG CCGCCGAAGC TGGATGCGAA AAATCGTCCA ACCTTTGCCT ATGGCCGTCT GATTCATGAG CATTGCGAAC GTCGTCCACA CTTCGACGCA GGCCGTTTTG CCAAAGAATT TGGCGACGAA GGCCACCGTC AGGGCTGGTG TCTCTACCAT CTTGGCTGTA AAGGGCCGGA AACCTGGGGC AACTGTTCTA CGTTACAGTT CTGTGACGTT GGCGGCGTCT GGCCAGTGGC GATCGGTCAT CCTTGCTATG GCTGTAACGA AGAAGGTATC GGCTTCCATA AGGGCATTCA CCAGCTTGCT CATGTCGAAA ACCAAACTCC GCGTTCAGAG AAACCTGACG TCAATATGAA AGAAGGCGGC AATATCTCTG CGGGCGCTGT CGGTCTGCTT GGCGGCGTAG TCGGTCTGGT TGCCGGCGTC AGCGTGATGG CGGTACGTGA ACTGGGGCGT CAGCAAAAGA AAGATAACGC TGACTCACGG GGAGAATAA
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Protein sequence | MTGDNTLITS HGINRRDFMK LCAALAATMG LSSKAAAEMA ESVSNPQRPP VIWIGAQECT GCTESLLRAT HPTVENLVLE TISLEYHEVL SAAFGHQVEE NKHNALEKYK GQYVLVVDGS IPLKDNGIYC MVAGEPIVDH IRKAADGAAA IIAIGSCSAW GGVAAAGVNP TGAVSLQEVL PGKTVINIPG CPPNPHNFLA TAAHIITYGT PPKLDAKNRP TFAYGRLIHE HCERRPHFDA GRFAKEFGDE GHRQGWCLYH LGCKGPETWG NCSTLQFCDV GGVWPVAIGH PCYGCNEEGI GFHKGIHQLA HVENQTPRSE KPDVNMKEGG NISAGAVGLL GGVVGLVAGV SVMAVRELGR QQKKDNADSR GE
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