| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3492 |
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| Symbol | hypA |
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| ID | 6871846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3354529 |
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| End bp | 3354870 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642786484 |
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| Product | hydrogenase nickel incorporation protein HybF |
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| Protein accession | YP_002217121 |
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| Protein GI | 198243433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.919493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGAGC TGTCTCTTTG CCAAAGCGCC GTTGAAATTA TTCAGCAGCA GGCAGAACAG
CACGGCGTGG CGCGCGTCAC CGGCGTATGG CTGGAGATAG GCGCGCTTTC GTGCGTTGAA
GAGCGCGCGG TTCGTTTCAG CTTTGACATC GCCTGCCAGG GAACTTTAGC GCAAGGGTGC
GAATTGCACA TCGACTACAG ACCGGCCCAG GCCTGGTGCT GGGATTGCAG TCAGGTGGTG
GAAATTCTCA GGCATGACGC GCAATGTCCG CGTTGTCATG GCGATCGCCT GCGGGTGGAT
ACCGGCGATT CGTTGAAAGT AAAGAGTATT GAGGTCGAAT AA
|
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| Protein sequence | MHELSLCQSA VEIIQQQAEQ HGVARVTGVW LEIGALSCVE ERAVRFSFDI ACQGTLAQGC
ELHIDYRPAQ AWCWDCSQVV EILRHDAQCP RCHGDRLRVD TGDSLKVKSI EVE
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