Gene SeD_A3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3482 
SymboluxaC 
ID6873221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3345966 
End bp3347378 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content54% 
IMG OID642786476 
Productglucuronate isomerase 
Protein accessionYP_002217113 
Protein GI198243637 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.604959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGT TTATGACTGA AGATTTTCTA CTTAAAAACG ACATTGCCCG CACGCTGTAC 
CATAAATACG CCGCGCCCAT GCCGATTTAT GACTTCCACT GCCATTTAAG TCCGCAGGAA 
ATCGCCGACG ATCGCCGTTT CGATAACCTC GGTCAGATCT GGCTGGAAGG CGACCACTAT 
AAATGGCGAG CGCTACGAAG CGCAGGCGTG GATGAGTCGC TGATCACCGG CAAAGAGACC 
AGCGATTATG AAAAATATAT GGCCTGGGCC AATACCGTAC CAAAAACGCT GGGCAATCCG 
CTGTATCACT GGACGCACCT TGAACTACGC CGTCCATTTG GTATTACAGG TACGCTGTTC 
GGACCGGATA CCGCGGAAAG TATCTGGACG CAGTGTAATG AGAAACTGGC GACGCCGGCC 
TTTTCCGCGC GCGGTATTAT GCAGCAGATG AATGTGCGGA TGGTCGGAAC CACCGACGAC 
CCGATAGATT CTCTGGAATA TCACCGCCAG ATAGCCGCCG ACGACAGCAT TGATATTGAA 
GTCGCGCCAA GCTGGCGCCC CGACAAAGTT TTCAAAATCG AACTGGACGG CTTTGTCGAT 
TACCTGAGGA AACTGGAAGC GGCGGCAGAT GTCAGCATTA CCCGTTTCGA CGATTTACGT 
CAGGCGCTCA CTCGCCGCCT CGACCATTTC GCCGCCTGCG GCTGCCGCGC GTCGGATCAT 
GGCATTGAAA CGCTGCGATT TGCGCCGGTG CCCGACGACG CGCAGCTTGA CGCCATTCTG 
GGCAAACGTC TGGCTGGCGA AACGCTGAGC GAACTTGAGA TCGCCCAGTT TACCACGGCG 
GTGCTGGTCT GGCTGGGCCG TCAGTACGCC GCGCGCGGCT GGGTGATGCA GCTACATATT 
GGTGCGATCC GTAATAATAA TACCCGGATG TTCCGCCTGC TGGGGCCGGA TACCGGCTTT 
GACTCCATTG GCGATAATAA CATTAGCTGG GCGCTCTCCC GTTTGCTCGA CAGTATGGAT 
GTGACCAATG AACTGCCCAA GACTATCCTC TATTGCCTGA ACCCACGTGA TAACGAAGTC 
CTGGCGACCA TGATCGGTAA CTTCCAGGGG CCGGGAATTG CCGGAAAAGT GCAGTTTGGT 
TCCGGCTGGT GGTTTAACGA TCAGAAAGAC GGGATGCTGC GCCAACTGGA GCAACTGTCG 
CAAATGGGAC TGTTAAGTCA GTTTGTCGGG ATGCTGACCG ACTCCCGCAG TTTCCTTTCT 
TATACGCGAC ATGAATATTT CCGTCGTATT CTCTGTAACC TGCTGGGACA GTGGGCGCAG 
GACGGAGAGA TTCCTGATGA TGAAGCGATG CTAAGCCGTA TGGTTCAGGA TATCTGCTTC 
AATAATGCCC AGCGTTATTT CACGATTAAA TAA
 
Protein sequence
MATFMTEDFL LKNDIARTLY HKYAAPMPIY DFHCHLSPQE IADDRRFDNL GQIWLEGDHY 
KWRALRSAGV DESLITGKET SDYEKYMAWA NTVPKTLGNP LYHWTHLELR RPFGITGTLF 
GPDTAESIWT QCNEKLATPA FSARGIMQQM NVRMVGTTDD PIDSLEYHRQ IAADDSIDIE 
VAPSWRPDKV FKIELDGFVD YLRKLEAAAD VSITRFDDLR QALTRRLDHF AACGCRASDH 
GIETLRFAPV PDDAQLDAIL GKRLAGETLS ELEIAQFTTA VLVWLGRQYA ARGWVMQLHI 
GAIRNNNTRM FRLLGPDTGF DSIGDNNISW ALSRLLDSMD VTNELPKTIL YCLNPRDNEV 
LATMIGNFQG PGIAGKVQFG SGWWFNDQKD GMLRQLEQLS QMGLLSQFVG MLTDSRSFLS 
YTRHEYFRRI LCNLLGQWAQ DGEIPDDEAM LSRMVQDICF NNAQRYFTIK