Gene SeD_A3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3462 
Symbol 
ID6875815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3323886 
End bp3325211 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content45% 
IMG OID642786456 
Product4-hydroxybutyrate coenzyme A transferase 
Protein accessionYP_002217093 
Protein GI198242394 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.366103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATG TTAATGCAGT GTATGCCGAA AAATGCGTGA CGCCTGACGA GGCGGTTACT 
TTAATTACCT CCGGCAGTCA CCTCTCTATG GGAATGTTTG CAGCAGAGCC TCCAGCTTTG 
CTGAATGCGC TGGCAAAGCG AGCGAAAAGG GGAGAAATCA ACGATCTGCG GGTTTACTGT 
TATGAAACAG CCAGCATTGC CGGGAACACT ATTTTCCGTT ATGAGCTAAG TGACTATATT 
CATCTCTACA GTATGTTTAT TACCGGTATT GAACGGGCTT TAATACGTCA GGGGATTGAG 
AGTTCCGGGC GAAAAATAGT TAACTATGTA CCTTCAAATT TTCATCAGGC GACGCGATTA 
CTGGCTGATG ATATTGGTAT TGATACCTTT ATTCACACCG TGTCCCCTAT GGATAAGTAT 
GGCTATTTTA ATTTTGGAAC TGGAAACGAT TATTCCACCC GGATTGCGAG GACAGCTAAA 
AAGCTTATTG TCGAAGTTAA CAAATATATG CCACGCGTTC ATGGAGAAGG TGCTGCAATC 
CATATTTCAG AAATTGACGC CATTGTTGAA AACCATGTCC CTTTAATTGA ACTACCAATA 
CGTACTGCCG TAGCCGAAGA TATTGCTATC AGTCAGATTA TCGCTTCTCT TGTGCCAGAT 
GGCGCTTGTC TCCAGATGGG GGTCGGCGCA TTACCGGAGC TCATCTGTAA TGCGCTCAAG 
GAACATAATG ATCTGGGGGT CCATACAGAG GCGCTGAATC CGGGGTTGGT AAGTTTGATT 
CAACAAGGCG TCGTTACCAA TCAGCGTAAA AATATCGACC GGGGAATGTC TGTATTTACT 
TTTGCTATGG GACAAAAGGA TATGTATGAC TATCTCAACG ACAACCCCTC TTTTTTTAGT 
CGGCCTGTCG ATTATGTTAA CGATCCGGGG ATCATTGCGC AAAATGAGAA TGTTGTCTCC 
ATTAACGCTA CCTTACAAAT CGATCTCACT GGTGCCTGTA ACTCTGAATA TTTGCTTGGA 
CACCAGTACA GCGCTTCAGG AGGGCAATTG GATTTTGTCA GAGGCGCATA TGCATCTAAA 
GGAGGTCGTT CCATTATTAC GACCCGCTCA ACGGCCGCGA ATGATACGAT TTCTCGTATT 
GTTCCCCGCC TTGAGGGGCC TGTAACAACC CCACGAACGG ATACGCACTG GATAGTCACT 
GAATTTGGCT CCGTAAACCT GAAGGGGCTC TCTTCAACCG AGCGTGCGCT CAGCATCATT 
GAATTGGCAC ATCCCAATTT TCGGCAGCAA CTTAGAGTAG ATGCAAAAAA AATGCATCTG 
ATTTAA
 
Protein sequence
MMNVNAVYAE KCVTPDEAVT LITSGSHLSM GMFAAEPPAL LNALAKRAKR GEINDLRVYC 
YETASIAGNT IFRYELSDYI HLYSMFITGI ERALIRQGIE SSGRKIVNYV PSNFHQATRL 
LADDIGIDTF IHTVSPMDKY GYFNFGTGND YSTRIARTAK KLIVEVNKYM PRVHGEGAAI 
HISEIDAIVE NHVPLIELPI RTAVAEDIAI SQIIASLVPD GACLQMGVGA LPELICNALK 
EHNDLGVHTE ALNPGLVSLI QQGVVTNQRK NIDRGMSVFT FAMGQKDMYD YLNDNPSFFS 
RPVDYVNDPG IIAQNENVVS INATLQIDLT GACNSEYLLG HQYSASGGQL DFVRGAYASK 
GGRSIITTRS TAANDTISRI VPRLEGPVTT PRTDTHWIVT EFGSVNLKGL SSTERALSII 
ELAHPNFRQQ LRVDAKKMHL I