| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3460 |
|---|
| Symbol | |
|---|
| ID | 6872910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3322394 |
|---|
| End bp | 3323101 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642786454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002217092 |
|---|
| Protein GI | 198242001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.321568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAATTG GACCTTTTAT TAACGCTGGC GCAATTTTAT TCGGCGGCGT TATTGGCGCG
CTGTTAAGTC AGCGTCTGCC AGAACGGATT CGCGTCTCAA TGACGTCTAT TTTTGGTCTG
TGCTCTCTGG GAATTGGTAT TCTGCTGGTG ATGAAGTGCG CTAATCTTCC GGTGATGGTG
CTGGCGACGC TGGTCGGCGC GCTCATCGGC GAGTTTTGTT TGCTGGAAAA AGGCATTAAT
GGCGCAGTCG CGAAAATCCA ACAATTATTT ATGGCATCGG GTAAGAAACC GACACACGAC
TCATTTATTC AAAGTTACGT CGCTATCATT GTACTTTTTT GCGCCAGCGG CACCGGTATT
TTCGGCGCGA TGCATGAAGG GATGACCGGC GATCCAAACA TTTTGATCGC TAAATCTTTT
CTGGATTTTT TCACTGCCAT AATTTTCGCC TGTTCGCTTG GCATCGCCGT TTCGGCGATT
TGCGCACCGA TGTTGATTAT CCAGTTAACG CTTGCCGCCT GCGCCACCCT CATTCTTCCA
CTGACCACGC CGGCAATGAT GGGCGACTTT AGCGCCGTGG GCGGACTGCT GCTGGTGGCG
ACCGGCTTGC GTGTATGTGG AATCAAAATG TTTCCGGTAG TGAATATGCT CCCGGCGCTG
TTGCTGGCGA TGCCGATCTC CGCCGCATGG GCGATGTTTT TTGCCTGA
|
|---|
| Protein sequence | MVIGPFINAG AILFGGVIGA LLSQRLPERI RVSMTSIFGL CSLGIGILLV MKCANLPVMV
LATLVGALIG EFCLLEKGIN GAVAKIQQLF MASGKKPTHD SFIQSYVAII VLFCASGTGI
FGAMHEGMTG DPNILIAKSF LDFFTAIIFA CSLGIAVSAI CAPMLIIQLT LAACATLILP
LTTPAMMGDF SAVGGLLLVA TGLRVCGIKM FPVVNMLPAL LLAMPISAAW AMFFA
|
|---|
| |