Gene SeD_A3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3457 
SymbolnupG 
ID6871155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3318516 
End bp3319772 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content51% 
IMG OID642786451 
Productnucleoside permease NupG 
Protein accessionYP_002217089 
Protein GI198245802 
COG category 
COG ID 
TIGRFAM ID[TIGR00889] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.693342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA AGCTGCAGCT TAAAATACTC TCTTTTCTGC AGTTCTGTCT GTGGGGAAGC 
TGGCTCACTA CCCTGGGCTC GTATATGTTC GTCACCTTAA AATTTGACGG CGCATCTATT 
GGCGCAGTTT ATAGTTCACT GGGGATTGCC GCCGTCTTTA TGCCGACCTT GCTAGGCATT 
GTGGCTGACA AATGGCTGAG CGCGAAATGG GTCTATGCCC TGTGTCATGT TCTCGGCGCC 
ATCACGCTAT TCATGGCCGC GGAAGTCACT ACGCCTGGGG CGATGTTCTT TGTGATCCTG 
CTTAACTCGT TGGCCTATAT GCCGACGTTG GGCTTGATCA ATACTATATC GTATTACCGC 
CTGCAGTCTG CCGGCATGGA TATTGTGACT GACTTCCCGC CTATCCGTAT CTGGGGCACC 
ATTGGCTTTA TTCTGGCGAT GTGGGGCGTG AGTTTCTCCG GTTTCGAGCT GAGCCATATG 
CAGCTTTATA TCGGCGCGAC GCTTTCCGTT CTGCTGGTAC TGTTTACCTT TACCCTGCCG 
CACATTCCGG TGGCGAACCA ACAGAAAAAC CAGAGCTGGA CATCAATGCT GGGCCTTGAC 
GCTTTTGCGC TGTTTAAAAA TAAGCGGATG GCGATTTTCT TCATCTTCTC CATGATGCTG 
GGCGCGGAAC TGCAGATCAC CAACATGTTT GGCAACACCT TCCTGCATAG CTTTGATAAA 
GATCCGCTAT TCGCCAGTAG CTTTATCGTG CAGCACGCCT CGGTGATGAT GTCGATTTCG 
CAGATTTCTG AAACGTTATT CATCCTGACC ATTCCGTTCT TCCTGAGCCG TTATGGTATT 
AAGAACGTTA TGCTTATCAG TATTGTGGCG TGGATGCTGC GTTTCGGCCT GTTCGCTTAT 
GGCGACCCGA CGCCGTTCGG TACCGTTCTG CTGGTATTGT CGATGATTGT GTACGGCTGC 
GCCTTCGACT TCTTCAACAT TTCTGGCTCG GTGTTTGTCG AAAAAGAAGT ACGCCCGGAA 
ATCCGCGCCA GCGCGCAGGG GATGTTCCTG ATGATGACCA ATGGCTTCGG CTGTATCCTT 
GGCGGCATTG TGAGCGGTAA AGTGGTGGAG TATTACACTC AAAACGGCAT TACCGACTGG 
CAGACCGTGT GGCTCATCTT CGCAGGCTAC TCGCTGGTGC TGGCCTTCGC GTTCGTAGCC 
TTGTTCAAAT ACAAACACGT TCGCGTTCCG GCAAGTTCGC AACCCGTTGC ACATTAA
 
Protein sequence
MNLKLQLKIL SFLQFCLWGS WLTTLGSYMF VTLKFDGASI GAVYSSLGIA AVFMPTLLGI 
VADKWLSAKW VYALCHVLGA ITLFMAAEVT TPGAMFFVIL LNSLAYMPTL GLINTISYYR 
LQSAGMDIVT DFPPIRIWGT IGFILAMWGV SFSGFELSHM QLYIGATLSV LLVLFTFTLP 
HIPVANQQKN QSWTSMLGLD AFALFKNKRM AIFFIFSMML GAELQITNMF GNTFLHSFDK 
DPLFASSFIV QHASVMMSIS QISETLFILT IPFFLSRYGI KNVMLISIVA WMLRFGLFAY 
GDPTPFGTVL LVLSMIVYGC AFDFFNISGS VFVEKEVRPE IRASAQGMFL MMTNGFGCIL 
GGIVSGKVVE YYTQNGITDW QTVWLIFAGY SLVLAFAFVA LFKYKHVRVP ASSQPVAH