Gene SeD_A3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3444 
Symbol 
ID6873767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3308727 
End bp3309293 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID642786438 
ProductYGGT family protein 
Protein accessionYP_002217076 
Protein GI198244883 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.119003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGT TGACCTTCCT GCTCTCAACG GTAATTGAGC TGTATACCAT GGTGCTATTA 
TTGCGCGTGT GGATGCAGTG GGCCCGCTGT GACTTTTACA ACCCTTTCTC CCAGTTCGTG 
GTGAAAATTA CGCAGCCCAT CATCGGACCG CTGCGTCGTA TTATCCCGCC AATGGGGCCG 
ATTGACAGCG CTTCCCTGCT GGTGGCGTTT ATTCTTAGCG TTATTAAGGC GATAGTGCTG 
TTTAAGGTCA TTACGTTTCA GGCGATTATC TGGATTGCCG CGGTGCTTAT CTTGCTTAAA 
ACAATCGGCC TGCTGATCTT CTGGGTGCTG CTGGTCATGG CTATCATGAG CTGGGTGAGC 
CAGGGTCGTA GCCCGATTGA ATATGTATTG ATTCAGCTTG CCGAGCCGCT GCTCAGCCCG 
ATTCGCCGTA TACTGCCTGC GATGGGCGGC ATCGACTTCT CGCCGATGGT TCTGGTGCTG 
CTGCTGTATG TCGTTAATAT GGGGATCGCT GAAGTCTTAC AAGCGACAGG CAACATGTTG 
CTGCCGGGGC TGTGGATGGC GTTATGA
 
Protein sequence
MNTLTFLLST VIELYTMVLL LRVWMQWARC DFYNPFSQFV VKITQPIIGP LRRIIPPMGP 
IDSASLLVAF ILSVIKAIVL FKVITFQAII WIAAVLILLK TIGLLIFWVL LVMAIMSWVS 
QGRSPIEYVL IQLAEPLLSP IRRILPAMGG IDFSPMVLVL LLYVVNMGIA EVLQATGNML 
LPGLWMAL