Gene SeD_A3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3435 
SymbolsprT 
ID6872899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3301870 
End bp3302367 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID642786429 
Producthypothetical protein 
Protein accessionYP_002217067 
Protein GI198241978 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0526499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.00365775 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACCC CTCGTCTCCC TATCGCTATC CAGCAGGCCG TGATGCGCCG TCTGCGGGAA 
AATCTCGCCC AGGCGAACCT CAAGCTCGAT AGACATTATC CGGAGCCGAA ACTGGTGTAT 
ACGCAACGCG GCACCTCGGC GGGCACCGCC TGGCTGGAGA GCTACGAAAT CCGCCTCAAC 
CCGGTGTTAC TGCTGGAAAA CATCGACACC TTTATAGCAG AGGTCGTGCC GCATGAACTG 
GCGCATCTGT TGGTGTGGAA GCACTTCGGA CGCAAGGCTC CGCATGGCAA GGAATGGAAG 
TGGATGATGG AAAGCGTGCT GGGCGTTCCG GCCAGACGTA CTCATCAATT TGCGCTGCAA 
TCCGTACGGC GCAACACCTT TCCCTACCAT TGCCAATGCC AGCAACATCA ACTCACCGTC 
CGCCGTCATA ATCGGGTAGT ACGCGGCGAA GCGGTTTATC GTTGCGTTCA CTGCGGCGAA 
CCACTGGTCG CCGGGTAG
 
Protein sequence
MKTPRLPIAI QQAVMRRLRE NLAQANLKLD RHYPEPKLVY TQRGTSAGTA WLESYEIRLN 
PVLLLENIDT FIAEVVPHEL AHLLVWKHFG RKAPHGKEWK WMMESVLGVP ARRTHQFALQ 
SVRRNTFPYH CQCQQHQLTV RRHNRVVRGE AVYRCVHCGE PLVAG