Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3422 |
Symbol | |
ID | 6875175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3288886 |
End bp | 3289380 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642786419 |
Product | putative mannitol dehydrogenase |
Protein accession | YP_002217057 |
Protein GI | 198241835 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2731] Beta-galactosidase, beta subunit |
TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.00935563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTATATG GAAATATAGA GCAGCTTACT TTATTACCTT ACGTTAACCA CATTATTAAA AAACTTATCA TCGAAGCGGT GAAGATAGCT GAAGATCAGC CTGCTGGTAG ATATGAACTT TCTTTCCCGG AGTCATTTCT TATGATAAGC GAAGGAGAAA CACACTCTTC GTTAAACCGC AAAGCTGAAC TTCATAAAAA ATATATCGAT GTTCAGATTT TACTAAGCGG TTATGAGGAG ATTGGCTATT CCAACAAAAT TGATACCAGG ATAAAGGAGC TTGAGCATCT TCCTGATGAC ATCATCTTTC CTGAATGTGT CGCTAATGAG CAGTTCGTTA CATTAAATCC TGGCGATTTC GCGCTTTTTT ATCCCAACCA GATCCACCGT CCGCTTTGTA CGCGTGGTAA ACCTGCGCCG GTTAAAAAAG CGATTGTGAA AATTCCGGCC ACGGCATTTA GCGAGTCAAG CTTGCCCTGT CAGACGAAGG AATAA
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Protein sequence | MLYGNIEQLT LLPYVNHIIK KLIIEAVKIA EDQPAGRYEL SFPESFLMIS EGETHSSLNR KAELHKKYID VQILLSGYEE IGYSNKIDTR IKELEHLPDD IIFPECVANE QFVTLNPGDF ALFYPNQIHR PLCTRGKPAP VKKAIVKIPA TAFSESSLPC QTKE
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