Gene SeD_A3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3421 
Symbol 
ID6875557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3287737 
End bp3288627 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content48% 
IMG OID642786418 
Productputative hydrolase or acyltransferase 
Protein accessionYP_002217056 
Protein GI198245706 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.0121666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATA TTTTTAAATT AGAATTTATT TTTATTATCA ATATTATATT TTTAATAAAT 
GCTTCAGCAA CAACGATGGA CAAAGATAAA TTTGTGGAAG CGAATGGTAT CAAAATTCAT
TACGTTGAAG AGGGCGAGGG GCCTCCGCTG CTGTTGATTC ACGGTGGTGG TCTGACGGCG
AAAAGTTGGC AGGGATTAGC GAAAGAGGCA TCTCGATATT TTCGCGTCAT CATGCCGGAC
AGTCGTGGAC ATGGATTAAC CAATAACCCG CAAGGAACGT TTAGCTATGA TCTGATGACG
GAAGATATGG CGGCTTTTGT TAAAGCGCTG AAGCTGGAAA AACCGCTGGT GATGGGTTAC
AGCGATGGCG GCATGGTCGT TCTGAAGTTA ACCAGCCGAT ACCCGGATCT AGCGCGCGCT
GCTATCGTCG GCGGCGCAAC GCATCGCTTT GCTACGACCC ATTACATGCA GGGGATGGAA
ATTTTTTATG GTAAAGGAAT GCCTCAGGGG CAATTGACGG ATCGAGATCT GGATAAAATG
GCTTCGGATG CGCCCGGGAT GGTTAAATTT TATCAGAACA TGCATCATCC AGAGCAAAAA
GACTACTGGC GCACGTTTCT CGAAGGTGTC TGGCCAATGT GGACAACGCC CACATCGCTG
ACGGAAGAAG AGGTGAAAAA AATCCACATT CCTGTGCTAT TACTGGACGG CGACCGGGAT
GAATTTTTCA CCGTTGAAGA AGTTACCGAG CTGTACCGGC TGCTGCCTCA GGCGGAGATG
ACCCTCATTC CCGGTAGCGG TCACGCCATT TTCCAGACGC CGGGGAAAAC ACCGCTGTTT
TACGCATTAG TGCTTGAGTT TTTACAGCGG CAACTCCCTA AGGCCTCTTA A
 
Protein sequence
MNHIFKLEFI FIINIIFLIN ASATTMDKDK FVEANGIKIH YVEEGEGPPL LLIHGGGLTA 
KSWQGLAKEA SRYFRVIMPD SRGHGLTNNP QGTFSYDLMT EDMAAFVKAL KLEKPLVMGY
SDGGMVVLKL TSRYPDLARA AIVGGATHRF ATTHYMQGME IFYGKGMPQG QLTDRDLDKM
ASDAPGMVKF YQNMHHPEQK DYWRTFLEGV WPMWTTPTSL TEEEVKKIHI PVLLLDGDRD
EFFTVEEVTE LYRLLPQAEM TLIPGSGHAI FQTPGKTPLF YALVLEFLQR QLPKAS