| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3418 |
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| Symbol | tktA |
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| ID | 6872963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3283486 |
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| End bp | 3285477 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642786416 |
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| Product | transketolase |
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| Protein accession | YP_002217054 |
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| Protein GI | 198243103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.0637477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAC GTAAAGAGCT TGCCAATGCT ATTCGTGCGC TGAGCATGGA CGCAGTACAG
AAAGCCAAAT CCGGTCACCC GGGTGCCCCG ATGGGTATGG CTGACATTGC CGAAGTCCTG
TGGCGTGATT TCCTGAACCA CAACCCGACC AACCCGTCCT GGGCCGACCG CGACCGCTTC
GTGCTGTCCA ATGGCCACGG CTCAATGCTG ATTTACAGCC TGCTGCACCT CACCGGTTAT
GACCTGCCGA TGTCCGAGCT GCAGAATTTC CGTCAGCTAC ATTCAAAAAC CCCTGGTCAC
CCGGAAGTGG GCTACACCGC TGGCGTTGAA ACCACTACTG GCCCGCTGGG TCAGGGTATT
GCCAACGCCG TCGGGATGGC GATTGCCGAG AAAACTCTGG CGGCGCAGTT TAATCGTCCT
GGCCACGATA TCGTTGACCA CTTCACCTAC GTCTTTATGG GCGACGGCTG CATGATGGAA
GGCATTTCTC ACGAAGTGTG CTCTCTGGCT GGTACTCTGA AACTGGGCAA ACTGATCGCG
TTCTATGATG ACAACGGTAT CTCTATCGAT GGTCATGTTG AAGGCTGGTT CACCGATGAC
ACCGCGAAAC GTTTTGAAGC CTACGGCTGG CACGTTATCC GTGGCATTGA CGGTCACGAT
GCCGACGCCA TTAAACGCGC CACGGAAGAA GCTCGCGCCG TGACTGACAA ACCGTCCCTG
CTGATGTGCA AAACCATCAT CGGTTTCGGT TCGCCGAACA AACAGGGTAC CCACGATTCC
CACGGCGCGC CGCTGGGCGA CGCGGAAATC GCGCTGACCC GCGAACAGTT GGGCTGGAAA
TACGCGCCGT TCGAAATCCC GTCTGAAATC TACGCCCAGT GGGATGCGAA AGAAGCCGGC
CCGGCGAAAG AATCCGCATG GAATGAGAAA TTCGCGGCTT ATGAGAAAGC CTTCCCGCAG
GAAGCTGCTG AATTCACTCG TCGTATGAAA GGCGACATGC CGGCTGACTT CGATGCGAAA
GCGAATGAGT TCATCGCTAA ACTGCAGGCG AATCCATCCA AAATCGCCAG CCGTAAAGCG
TCCCAGAATG CCATCGAAGC CTTCGGTCCG CTGTTGCCGG AATTCCTCGG CGGCTCCGCT
GACCTGGCAC CTTCTAACCT GACCCTGTGG TCCGGTTCGA AAGCGATTAA CGAAGATGCC
GCAGGTAACT ACATTCATTA CGGTGTGCGC GAATTCGGTA TGACCGCTAT CGCCAACGGT
ATCGCCCTGC ACGGCGGTTT CCTGCCGTAC ACCTCCACCT TCCTGATGTT CGTCGAATAT
GCCCGTAACG CAGTGCGTAT GGCAGCGTTG ATGAAACAGC GTCAGGTGAT GGTCTATACC
CACGACTCCA TCGGTCTGGG CGAAGATGGC CCGACGCACC AGCCGGTCGA GCAGGTGGCA
AGCCTGCGCG TAACGCCGAA CATGTCCACA TGGCGTCCGT GCGACCAGGT GGAATCCGCG
GTGGCGTGGA AATATGGCGT AGAGCGTCAG GATGGCCCAA CCGCGCTGAT CCTCTCCCGT
CAGAACCTGG CGCAGCAGGA ACGTACTGAA GAGCAACTGG CGAATATCGC CCGCGGTGGT
TACGTACTGA AAGATTGTGC GGGCCAGCCG CAGATTATCT TCATTGCGAC CGGTTCAGAG
GTTGAGCTGG CGGTTGCCGC TTACGAAAAA CTAACTGCCG AAGGCGTGAA GGCGCGCGTG
GTTTCCATGC CGTCTACCGA CGCATTCGAC AAGCAGGATG CGGCTTACCG TGAATGCGTG
CTGCCGAAGG ACGTCTCTGC GCGTGTAGCG ATTGAAGCGG GTATCGCTGA CTACTGGTTC
AAATACGTCG GCCTGAACGG CGCTATTGTC GGGATGACCA CCTTCGGTGA ATCCGCCCCG
GCAGAGCTGT TGTTTGAAGA GTTTGGCTTC ACGGTGGACA ACGTGATCGC CAAAGCGAAA
GCACTGCTGT AA
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| Protein sequence | MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDFLNHNPT NPSWADRDRF
VLSNGHGSML IYSLLHLTGY DLPMSELQNF RQLHSKTPGH PEVGYTAGVE TTTGPLGQGI
ANAVGMAIAE KTLAAQFNRP GHDIVDHFTY VFMGDGCMME GISHEVCSLA GTLKLGKLIA
FYDDNGISID GHVEGWFTDD TAKRFEAYGW HVIRGIDGHD ADAIKRATEE ARAVTDKPSL
LMCKTIIGFG SPNKQGTHDS HGAPLGDAEI ALTREQLGWK YAPFEIPSEI YAQWDAKEAG
PAKESAWNEK FAAYEKAFPQ EAAEFTRRMK GDMPADFDAK ANEFIAKLQA NPSKIASRKA
SQNAIEAFGP LLPEFLGGSA DLAPSNLTLW SGSKAINEDA AGNYIHYGVR EFGMTAIANG
IALHGGFLPY TSTFLMFVEY ARNAVRMAAL MKQRQVMVYT HDSIGLGEDG PTHQPVEQVA
SLRVTPNMST WRPCDQVESA VAWKYGVERQ DGPTALILSR QNLAQQERTE EQLANIARGG
YVLKDCAGQP QIIFIATGSE VELAVAAYEK LTAEGVKARV VSMPSTDAFD KQDAAYRECV
LPKDVSARVA IEAGIADYWF KYVGLNGAIV GMTTFGESAP AELLFEEFGF TVDNVIAKAK
ALL
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