Gene SeD_A3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3411 
Symbolpgk 
ID6872888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3277785 
End bp3278948 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content55% 
IMG OID642786409 
Productphosphoglycerate kinase 
Protein accessionYP_002217047 
Protein GI198242923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.131845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAA TTAAGATGAC CGATCTGGAT CTGGCCGGGA AACGCGTTTT TATCCGTGCG 
GATCTGAACG TACCTGTTAA AGAAGGGAAA GTGACCAGCG ACGCGCGTAT CCGCGCCTCT 
CTGCCGACCA TCGAACTGGC TCTGAAACAG GGCGCGAAAG TGATGGTAAC TTCCCACCTG 
GGTCGTCCTA CCGAAGGCGA GTACAACGAA GAATTCTCTC TGCTGCCGGT TGTTAACTAC 
CTGAAAGACA AACTGTCTAA CCCGGTTCGC CTGGTCAAAG ATTACCTGGA CGGCGTTGAC 
GTGGCCGAAG GTGAGCTGGT GGTTCTGGAA AACGTTCGCT TTAACAAAGG CGAAAAGAAA 
GACGACGAAG CGCTGTCTAA AAAATACGCC GCCCTGTGTG ACGTATTCGT GATGGACGCC 
TTTGGTACTG CGCACCGCGC GCAGGCTTCT ACCCACGGTA TCGGCAAATT TGCTGATGTT 
GCGTGCGCAG GCCCGCTGCT GGCCGCTGAA CTGGATGCGC TGGGTAAAGC GCTGAAAGAA 
CCGGCTCGTC CGATGGTGGC TATCGTTGGT GGTTCTAAAG TATCTACCAA ACTGACCGTT 
CTGGATTCCC TGTCTAAAAT CGCTGACCAG CTGATTGTCG GCGGCGGTAT CGCCAACACC 
TTCGTTGCCG CTCAGGGCCA CAGCGTCGGT AAATCCCTGT ACGAAGCTGA CCTGGTTGAC 
GAAGCAAAAC GTCTGCTGAC CACTTGCGAT ATCCCGGTTC CGACCGATGT TCGCGTTGCC 
ACCGAGTTCT CCGAAACCGC ACCGGCGACT CTGAAATCCG TTAACGACGT GAAAGAAGAC 
GAGCAGATCC TGGATATCGG CGATGCTTCC GCTCAGCAGC TGGCTGAAAT CCTCAAGAAT 
GCCAAAACCA TTCTGTGGAA CGGCCCGGTT GGCGTGTTTG AGTTCCCGAA CTTCCGTAAA 
GGGACTGAAA TCGTGGCGAA TGCCATCGCT GATAGCGAAG CGTTTTCCAT CGCTGGCGGC 
GGCGACACCC TGGCGGCAAT CGACCTGTTC GGCATTGCTG ACAAAATTTC CTACATTTCT 
ACTGGCGGCG GCGCATTCCT CGAATTCGTG GAAGGTAAAG TTCTGCCAGC CGTAGCGATG 
CTCGAAGAGC GCGCTAAGAA GTAA
 
Protein sequence
MSVIKMTDLD LAGKRVFIRA DLNVPVKEGK VTSDARIRAS LPTIELALKQ GAKVMVTSHL 
GRPTEGEYNE EFSLLPVVNY LKDKLSNPVR LVKDYLDGVD VAEGELVVLE NVRFNKGEKK 
DDEALSKKYA ALCDVFVMDA FGTAHRAQAS THGIGKFADV ACAGPLLAAE LDALGKALKE 
PARPMVAIVG GSKVSTKLTV LDSLSKIADQ LIVGGGIANT FVAAQGHSVG KSLYEADLVD 
EAKRLLTTCD IPVPTDVRVA TEFSETAPAT LKSVNDVKED EQILDIGDAS AQQLAEILKN 
AKTILWNGPV GVFEFPNFRK GTEIVANAIA DSEAFSIAGG GDTLAAIDLF GIADKISYIS 
TGGGAFLEFV EGKVLPAVAM LEERAKK