Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3400 |
Symbol | |
ID | 6875758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3269388 |
End bp | 3269984 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642786402 |
Product | putative ligase |
Protein accession | YP_002217040 |
Protein GI | 198243316 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00411239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.605032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAC TTCCCGAACT CTCTTTATCA CGACAAGAAA TCCGCCGAAT GATTCGGCAA CGTCGTCGTG CGCTGACGCC AGAGCAGCAA CGCCGCTTTG GTCAACAGGC CGCCGCCCGA ATGCTCAGCT TTCCTCCCGT CGTGATGGCG CACACTGTCG CCGTGTTTCT CTCCTTTGAT GGCGAACTCG ACACCCAGCC GCTGATTGAA CAGCTATGGC GAGCAGGCAA GCGCGTCTAC CTTCCGGTTC TTCATCCCTT CAGCCCTGGC AACCTCCTGT TCCTGCACTA TCATCCGCAG AGTGCGCTGG TGACCAACCG CTTAAAGATC CGGGAGCCAC GGCTTGATGT CCGCGACGTA TTGCCGCTGG CAAAGCTGGA TGTGCTGGTA ACGCCATTAG TGGCGTTTGA CGAAGGCGGG CAGCGCCTGG GGATGGGCGG CGGATTTTAT GACCGTACGT TGCAAAACTG GCAGCAGCAT AAGATCCAGC CCGTGGGCTA CGCGCATGAT TGCCAGTTAG TAGAAAAACT GCCAGTTGAA GAGTGGGATA TCCCGCTGCC TGCGGTGGTG ACGCCGTCCA AAATTTGGGA GTGGTAG
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Protein sequence | MTQLPELSLS RQEIRRMIRQ RRRALTPEQQ RRFGQQAAAR MLSFPPVVMA HTVAVFLSFD GELDTQPLIE QLWRAGKRVY LPVLHPFSPG NLLFLHYHPQ SALVTNRLKI REPRLDVRDV LPLAKLDVLV TPLVAFDEGG QRLGMGGGFY DRTLQNWQQH KIQPVGYAHD CQLVEKLPVE EWDIPLPAVV TPSKIWEW
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