Gene SeD_A3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3389 
Symbol 
ID6872568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3257873 
End bp3258766 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content44% 
IMG OID642786392 
Productputative outer membrane protein 
Protein accessionYP_002217030 
Protein GI198242459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT TTATATTTCT GCCATTAATG ACATATTTTC TATTAATGAA TGCAATGGCA 
GCTAACGGAG AAAATAATCC CAGTAATCTA TTAGGTGCAC CAGTTAATAC CGCTATTTCT 
GGTGGTTCAG TATTGCCGGA AGGAAAGTTA TTAACCGCCG TGAATAGCTC ATTTCGCGAT 
AAAGATCATC AAATCGAGGG GCACGGAAGT CCGGATGTTT ACTCCCAGAT ATGGTTATTG 
AAGATTCGTT ACGGTTTGAC CGACAGACTG GAATTATCAA CTGTGGGTTC CTATATCAAT 
AACAAACGAG ACAATCTGTC TCCTGAGCAC ATAGAGGGAA TGGGCGACCA ATCGGTGGGG 
GTCAATTATG CTTTAATGAG CCAGCGAAGA GGTGATCCGT TTTGGGTTAC GGTAGGTGGG 
GCAGTATTAC TACCCACCGG GCAAGATGGA GATAATCATT TGCCTGGGAA TAGCGCCTGG 
GGAGGAAGAG TAACACTCAC TTTAACAAAA TTATTTACTC CTAACATTAA AGGGGATATG 
GGTTTTGTCT ATCAGGGACC ATTTGAGCGC GGTAACCAGG ACGTGAAACG AGGTAACGAA 
TTCCAGTGGA ATACCCAGGT GCGGTATATG TTTAGCGATT TACCGCTGGA TCTTGGTCTG 
GAAAGTGCCT ACAGCAATAA TGCCTCTGGA ACGAAAAAAC TGTCTAATGG CAGCGTAATT 
AATAACCATT CTGGAACTAC CGAATGGGTT GTTGGTCCGT CATTTAATAT TGCCGTCGAT 
TCACTGAAAT TATGGTTTGG TGCCGGAGCC TTCTTCCCGG TAATGCAGGA AGCGAAGTCG 
CCAACCAAAA TGGAAGATGT ACGCTGGGAA TTTAAAATAG GTAAGACCTG GTAA
 
Protein sequence
MKRFIFLPLM TYFLLMNAMA ANGENNPSNL LGAPVNTAIS GGSVLPEGKL LTAVNSSFRD 
KDHQIEGHGS PDVYSQIWLL KIRYGLTDRL ELSTVGSYIN NKRDNLSPEH IEGMGDQSVG 
VNYALMSQRR GDPFWVTVGG AVLLPTGQDG DNHLPGNSAW GGRVTLTLTK LFTPNIKGDM 
GFVYQGPFER GNQDVKRGNE FQWNTQVRYM FSDLPLDLGL ESAYSNNASG TKKLSNGSVI 
NNHSGTTEWV VGPSFNIAVD SLKLWFGAGA FFPVMQEAKS PTKMEDVRWE FKIGKTW