Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3386 |
Symbol | |
ID | 6871438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3255102 |
End bp | 3255761 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642786389 |
Product | hemolysin-3 |
Protein accession | YP_002217027 |
Protein GI | 198243670 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCAAA AACCATTAAT GACGCAGGGA TATTCGCTGG CTGAGGAAAT CGCCAACAGT ATTAGCCACG GCATTGGATT GGTATTTGGT ATTGTCGGCC TGGTGCTGTT GTTGGTTCAG GCGGTAGAGG CGAATGCGGG TATGACGGCT ATCGCCAGCT ACAGTTTATA TGGCGGGAGC ATGATCCTGC TTTTTCTTGC CTCAACGCTT TATCATGCCA TTCCTCATCA GCGGGCAAAA ATCTGGTTAA AGAAATTTGA TCACTGCGCT ATCTATCTGC TCATTGCCGG AACCTATACG CCATTTCTGC TGGTAGGTCT GGATTCGCCG CTGGCGCGCG GACTAATGAT TGTGATCTGG AGCCTGGCGC TATTCGGTAT CCTCTTCAAG TTGACGATTG CGCACCGATT TAAAGTGCTT TCACTGGTTA CGTATCTGGC AATGGGCTGG CTGTCGCTGA TAGTGGTTTA TCAGTTGGCG ATTAAGCTGG CGATAGGCGG CGTGACGCTG CTGGCGGTAG GTGGCGTCGT TTACTCGCTG GGCGTAATTT TCTATGTTTG CAAACGCATA CCTTATAACC ACGCCATCTG GCATGGCTTT GTGCTGGGCG GCAGCGTGTG CCACTTCCTG GCCATCTATT TGTATGTGGG ACAGGCGTAA
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Protein sequence | MVQKPLMTQG YSLAEEIANS ISHGIGLVFG IVGLVLLLVQ AVEANAGMTA IASYSLYGGS MILLFLASTL YHAIPHQRAK IWLKKFDHCA IYLLIAGTYT PFLLVGLDSP LARGLMIVIW SLALFGILFK LTIAHRFKVL SLVTYLAMGW LSLIVVYQLA IKLAIGGVTL LAVGGVVYSL GVIFYVCKRI PYNHAIWHGF VLGGSVCHFL AIYLYVGQA
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