Gene SeD_A3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3385 
Symbol 
ID6872126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3254006 
End bp3254986 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID642786388 
Productputative global regulator 
Protein accessionYP_002217026 
Protein GI198242202 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTA TCTCCTTTCC ACCACGTCAT CCTTCATCGT CAGCCCGCCT GCCGCTGACG 
CTGATCGCGC TTGACGACTG GGCGCTGTCG ACCATTACCG GCGTAGACAG TGAAAAGTAT
ATTCAGGGCC AGGTCACCGC TGACGTAAGC CAGATGACTG AACAGCAACA CCTTCTCGCC
GCCCACTGCG ATGCTAAAGG TAAGATGTGG AGCACTCTGC GACTGTTCCG TGAGCGCGAC
GGTTTCGCCT GGATTGAACG CCGTAGCGTG CTTGAAGCGC AATTAACGGA GCTGAAAAAG
TACGCCGTAT TTTCCAAAGT GGTCATCGCG CCGGATGACG AACGCGTATT GCTTGGCGTG
GCAGGTTTTC AGGCCCGCGC GGCGCTGGCT AATGTCTTTA GCGTACTGCC CAATAGCGAA
AATCAGGTGG TCAGAGACGG CGCCTCCACG CTGCTATGGT TTGAACATCC TGCGGAACGA
TTCCTGCTTG TCACCGATGT CGCGACGGCC AACATGTTAA CGGAGAAGTT GCATGGCGAA
GCCGAACTGA ATAACAGCCA ACAGTGGCTG GCATTGGATA TTGAAGCAGG CATTCCGGTG
ATTGACGCGG CGAACAGCGG TCAATTTATC CCCCAGGCGA CTAACCTACA GGCGCTGGGC
GGTATCAGCT TCAAGAAAGG CTGCTACACC GGACAGGAGA TGGTCGCACG GGCAAAATTC
CGCGGCGCCA ATAAACGCGC TCTTTGGTTG CTGGCGGGCA AAGCCAGCCG GGTACCGGAA
GCAGGAGAAG ATCTGGAGCT ACAGATGGGC GAGAACTGGC GTCGTACCGG CGCTATTCTG
GCGGCGACGC AGTTGGACGA TGGTCAGTTA CTGGTTCAGG CCGTCATGAA TAACGATTTA
GAAGCCGAAA GCGTCTTCCG CGTTCGCGAC GATGCCAACA CCCTGCATAT CGTCCCGCTG
CCCTACTCGC TGGAAGAGTG A
 
Protein sequence
MAFISFPPRH PSSSARLPLT LIALDDWALS TITGVDSEKY IQGQVTADVS QMTEQQHLLA 
AHCDAKGKMW STLRLFRERD GFAWIERRSV LEAQLTELKK YAVFSKVVIA PDDERVLLGV
AGFQARAALA NVFSVLPNSE NQVVRDGAST LLWFEHPAER FLLVTDVATA NMLTEKLHGE
AELNNSQQWL ALDIEAGIPV IDAANSGQFI PQATNLQALG GISFKKGCYT GQEMVARAKF
RGANKRALWL LAGKASRVPE AGEDLELQMG ENWRRTGAIL AATQLDDGQL LVQAVMNNDL
EAESVFRVRD DANTLHIVPL PYSLEE