Gene SeD_A3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3370 
Symbol 
ID6870983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3243578 
End bp3244378 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID642786375 
Productputative inner membrane protein 
Protein accessionYP_002217014 
Protein GI198242570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.367561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA ATACATGGAC AATTTTGCTT ATGTCGGCGC ATCTGACGGC CTGTGCCGTC 
CCTGGCACAG AAAAATATCA GACCAGCATG GACAGCGTTA CGGCAGAAAA AATAAGCCGG 
ATTATCCAGT CGGATGTCAT TCCTTATAAA GGCGAAAACC ATGGAGAAGT TATCAGCCGC 
GTATCGTCTG CTTTTCTCGG AACACCTTAT CAGGCGGATA CGCTCATCGG TGGGCCCGGC 
ATCCCCGAAG TCCTTGTAGC GAATTTCAAC GGCGTGGACT GCTTTACACT GGCTGATTAC 
GTTGAAGCCC TGGCCCGCAG CGATAATCAG AAATCGTTTC TGCATAATCT TGCCAGGACT 
CGCTACGCCG CGGGCAAAGT TGCTTATCTC AGCCGCCGGC ACTTCTTCTC TGACTGGTTC 
GCCGCAACAC CGCGTAATGC ACGGGATGTA ACGCCGGATA TCAGCCCTGA TTATGTCGTT 
GTTGACAAGC AGCTTAACCA TAAACCTGAT GGCGGCGAGT ACATTCCTGG TCTGGGCATC 
CATCCTCGTA AAATAAATTA CATTCCCGGA AGAGCCATCA ACCAGCAGGT CATGAACCAC 
CTAAAAAACG GGGATTATAT CGGTGTCTAC TCCCCGCTTG ACGGGCTGGA CGTTTCACAT 
GTGGGTATCG TAGTTCGCCA TGATGAACAG GTGTGGTTCA GGAACGCCTC CTCATTGGCC 
GCAAACAGAA AAGTGGTGGA TACACCGTTT ATGGAATACA TGCATTCCAG ACCGGGCATC 
GTTGTGTTGC GGGCTGAATG A
 
Protein sequence
MKVNTWTILL MSAHLTACAV PGTEKYQTSM DSVTAEKISR IIQSDVIPYK GENHGEVISR 
VSSAFLGTPY QADTLIGGPG IPEVLVANFN GVDCFTLADY VEALARSDNQ KSFLHNLART 
RYAAGKVAYL SRRHFFSDWF AATPRNARDV TPDISPDYVV VDKQLNHKPD GGEYIPGLGI 
HPRKINYIPG RAINQQVMNH LKNGDYIGVY SPLDGLDVSH VGIVVRHDEQ VWFRNASSLA 
ANRKVVDTPF MEYMHSRPGI VVLRAE