Gene SeD_A3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3369 
Symbol 
ID6873286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3242605 
End bp3242832 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content47% 
IMG OID642786373 
Productputative virulence-associated protein 
Protein accessionYP_002217012 
Protein GI198243468 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.75621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACAA CACTTTTTTT TAGTAACCGG ACCCAGGCAG TCAGATTGCC TAAATCGATA 
TCCTTTCCGG AGGATGTGAA ACATGTCGAA ATCATTGCGG TTGGTAGAAG CAGAATCATT
ACTCCAGTCG GAGAATCCTG GGACAGCTGG TTCGATGGCG AAGGCGCCAG TACTGATTTT
ATGAGTACCA GAGAACAACC CGCAGTACAG GAACGGGAAG GATTTTGA
 
Protein sequence
MHTTLFFSNR TQAVRLPKSI SFPEDVKHVE IIAVGRSRII TPVGESWDSW FDGEGASTDF 
MSTREQPAVQ EREGF