Gene SeD_A3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3358 
Symbol 
ID6874926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3231923 
End bp3232807 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content54% 
IMG OID642786362 
Productnickel/cobalt efflux protein RcnA 
Protein accessionYP_002217001 
Protein GI198244004 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAT TTTCGACACT TCTTCAGCAA GGAAACGGCT GGTTCTTCAT TCCCAGCGCC 
ATTTTATTAG GTATTTTGCA CGGGCTTGAA CCAGGGCACT CCAAAACCAT GATGGCGGCT
TTTATCATTG CCATTAAAGG TACGGTTAAA CAGGCTGTCA TGCTCGGTCT GGCAGCAACG
CTTTCTCATA CCGCGATCGT CTGGTTAATC GCTCTGGGTG GGATGTATCT TAGCCGGGCA
TTCACCGCAC AATCAGTGGA ACCATGGCTG CAGTTAATTT CTGCGATCAT TATTCTGAGC
ACCGCGTGCT GGATGTTCTG GCGGACATGG CGAGGCGAGC AGCAGTGGCT GGCGGGAAAC
CATCATCACG ACCACGACCA CGACCACGAC CACGACCACG ACCACGACCA CGACCACGAC
CACGACCACG ACCACGACCA CGACCACGAC CACGACCACG ACCATCATGG TCACATACAT
CCGGAAGGCG CAACGTCAAA AGCGTATCAG GATGCCCATG AACGCGCCCA TGCTGCCGAT
ATTCAACGCC GTTTTGATGG TCAAACAGTG ACTAATGGAC AGATCCTGCT ATTCGGCCTG
ACCGGAGGGC TTATCCCCTG TCCGGCTGCG ATCACTGTTT TACTGATTTG TATCCAGCTT
AAAGCGTTTA CGCTGGGCGC CACTATGGTG CTGAGCTTTA GTCTTGGCCT GGCATTGACG
CTGGTGACGG TAGGCGTTGG CGCGGCGATA AGCGTTCAAC AGGCAGCAAA GCGCTGGAGT
GGTTTTTCGA CGCTTGCCCG GCGGGCGCCC TATTTTTCGA GCATTCTGAT TGGTCTGGTC
GGCGTGTATA TGGGAATTCA TGGCTATACC GGGATCATGC AGTAA
 
Protein sequence
MGEFSTLLQQ GNGWFFIPSA ILLGILHGLE PGHSKTMMAA FIIAIKGTVK QAVMLGLAAT 
LSHTAIVWLI ALGGMYLSRA FTAQSVEPWL QLISAIIILS TACWMFWRTW RGEQQWLAGN
HHHDHDHDHD HDHDHDHDHD HDHDHDHDHD HDHDHHGHIH PEGATSKAYQ DAHERAHAAD
IQRRFDGQTV TNGQILLFGL TGGLIPCPAA ITVLLICIQL KAFTLGATMV LSFSLGLALT
LVTVGVGAAI SVQQAAKRWS GFSTLARRAP YFSSILIGLV GVYMGIHGYT GIMQ