Gene SeD_A3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3356 
Symbol 
ID6871512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3230270 
End bp3231499 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content47% 
IMG OID642786360 
Productinner membrane transport protein YqeG 
Protein accessionYP_002216999 
Protein GI198245911 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA TTTGGTCAAA AGATGAGACT CTCTGGAGTT TTGCATTATA CGGAACGGCT 
GTAGGCGCAG GCACTCTTTT CCTTCCCATC CAGTTGGGAT CGGCAGGCGC AATCGTGCTA
TTTATTACCG CGCTGGTCGC CTGGCCTCTA ACATACTGGC CGCATAAGGC GCTGTGTCAG
TTTATTCTTT CCTCAAAGAC TTCTGCAGGT GAGGGAATTA CTGGCGCCGT TACTCATTAT
TACGGCAAGA AAATCGGCAG TATTATTACC ACGCTTTATT TCATTGCGTT TTTTGTCGTG
GTATTAATTT ATGCTGTGGC GATTACCAAT TCCCTGACAG AGCAATTAGC GAAGCATATT
CAGATAGATA TTCGCATCCG GATGGCAGTT AGCTTCGGCG TAGTACTTAT CCTGAATATG
ATTTTCTTAA TGGGAAGACA TGCCACTCTT CGCGTAATGG GCTTTTTAGT CTTTCCACTT
ATCGCTTACT TCTTGTTCCT TTCGCTCTAC TTAACCGGAA GCTGGCAACC CTCGTTACTG
ACCGGGCAGA TGTCTTTGGA TAGTCACACG TTGCATCAGG TATGGATTTC TATTCCGGTG
ATGGTTTTTG CTTTTAGCCA TACGCCCATT ATTTCGACGT TTGCCATCGA CAGACGGGAA
AATTTTGGCG ATCAGGCCAT GGATAAATGC AAAAAGATCA TGAAGGTCGC CTATCTGATT
ATCTGCCTGA GCGTGCTGTT CTTTGTCTTT AGCTGCCTGC TCTCCATTCC GCCGTCATAC
ATTGAAGACG CGCGCAACGA AGGCGTTACC ATCCTTTCCG CGCTCTCGAT GATGCCCAAT
GCGCCGGCCT GGCTCTCTAT TTCCGGTATT ATCGTTGCCG TCGTGGCCAT GTCGAAATCT
TTCCTCGGCA CCTATTTCGG CGTCATTGAG GGCGCAACCG AGATGGTAAG AACCACCCTA
CAGCAGGTTG GCGTAAAAAA AAGCCGGGCG TTCAATCGCG CGCTGTCTAT CATGCTGGTT
TCCGGGATTA CGTTTATTAT TTGCTGTATT AACCCGAATG CCATCTCTAT GATTTATGCC
ATTAGCGGCC CGCTCATTGC GATGATCCTG TTTATTATGC CCACGTTGTC AACGTACCTG
ATACCGGCAT TGAAACCCTA CCGTTCAATA GGTAATTTCA TTACGTTGGT CGTCGGTTTA
CTTTGCGTAT CGGTGATGTT TTTCGGCTAA
 
Protein sequence
MSKIWSKDET LWSFALYGTA VGAGTLFLPI QLGSAGAIVL FITALVAWPL TYWPHKALCQ 
FILSSKTSAG EGITGAVTHY YGKKIGSIIT TLYFIAFFVV VLIYAVAITN SLTEQLAKHI
QIDIRIRMAV SFGVVLILNM IFLMGRHATL RVMGFLVFPL IAYFLFLSLY LTGSWQPSLL
TGQMSLDSHT LHQVWISIPV MVFAFSHTPI ISTFAIDRRE NFGDQAMDKC KKIMKVAYLI
ICLSVLFFVF SCLLSIPPSY IEDARNEGVT ILSALSMMPN APAWLSISGI IVAVVAMSKS
FLGTYFGVIE GATEMVRTTL QQVGVKKSRA FNRALSIMLV SGITFIICCI NPNAISMIYA
ISGPLIAMIL FIMPTLSTYL IPALKPYRSI GNFITLVVGL LCVSVMFFG