Gene SeD_A3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3354 
Symbol 
ID6875262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3229673 
End bp3230128 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content52% 
IMG OID642786358 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_002216997 
Protein GI198242778 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATG ACGCCATACA ACGTCGCTCG CTGCCGGAGC GTATTTTCCA TGCTGTCTGT 
TTTGAAGGTA TTGCGACTGC GATACTGACG CCAACGACCG CCTGGCTAAT GCAGCGCTCG 
GTGCTGGAGA TGGGCGGCCT GACGATATTG CTGGCAACGA CGGCCATGAT CTGGAATATC 
ATTTATAACG CTCTGTTTGA TCGATTGTGG CCCGCGCATC AGGTGAGACG AACCGCCAAA 
GTGCGCGCAC TCCATGCGTT AGGATTTGAA AGTGGGTTTA TTGTCATTGG CGTGAGTATT 
GTCGCCTGGG TACTGAATGT CAGCCTGCTA CAAGCATTCA CCCTGGAAAT TGGTTTCTTC 
CTGTTCTTTT TGCCGTACAC GATGCTGTAC AACTGGGCAT ACGATGTTTT ACGCCAGCGA 
ATAGTGACCC GCCGCCAACA GCGCGTTAGT GCATGA
 
Protein sequence
MQHDAIQRRS LPERIFHAVC FEGIATAILT PTTAWLMQRS VLEMGGLTIL LATTAMIWNI 
IYNALFDRLW PAHQVRRTAK VRALHALGFE SGFIVIGVSI VAWVLNVSLL QAFTLEIGFF 
LFFLPYTMLY NWAYDVLRQR IVTRRQQRVS A