Gene SeD_A3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3337 
Symbol 
ID6873750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3214424 
End bp3215626 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content59% 
IMG OID642786344 
Productlysophospholipid transporter LplT 
Protein accessionYP_002216983 
Protein GI198243654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0044358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAGT CAGTACGTAC TAACACCTCC ATCTGGTCGA AAGGGATGCT GTCGGTGATT 
GTCGCGCAGT TTCTCTCGGC TTTTGGCGAT AATGCGCTGC TGTTTGCGAC GCTGGCACTG
CTGAAAGCTC AGTTTTACCC GGACTGGAGC CAGCCTGTTT TGCAAATGGT GTTTGTGGGC
GCTTACATTC TTTTTGCGCC GTTTGTCGGC CAGATAGCGG ACAGCTTTGC CAAAGGCCGG
GTGATGATGG TCGCCAATGG TCTTAAACTG GCGGGAGCGG CAGGTATCTG CCTCGGCGTG
AATCCTTTTG TCGGTTATAC GTTGGTCGGG ATTGGCGCGG CGGCTTATTC TCCGGCGAAA
TACGGTATTC TGGGCGAACT GACGACGGGC GATAAGTTGG TGAAAGCCAA TGGTCTGATG
GAAGCCTCTA CGATTGCGGC GATTTTGCTC GGTTCCGTCG CGGGCGGCGT ATTGGCCGAC
TGGCATGTCA TCGCCGCGCT GGTTGCCTGC GCGTTGGCCT ACGCTGGCGC AGTGGCGGCG
AACCTGTTTA TCCCGAAGCT TGTGGCGGCG CGTCCAGGAC AATCCTGGCG GTTGTCGGCG
ATGACGCGTA GCTTCTTCAG CGCTTGCGTT GTCCTTTGGC GTAACGGTGA AACGCGTTTT
TCGCTGGTGG GGACCGGGCT ATTCTGGGGC GCAGGTGTGA CGCTGCGTTT TCTGCTGGTG
CTGTGGGTGC CGGTGGCGCT GGGGATTACG GATAACGCCA CGCCGACTTA CCTGAACGCC
ATGGTGGCGG TAGGCATTGT GGTCGGCGCG GGCGCGGCGG CAAAACTGGT GACGCTGGAG
ACCGTATCGC GCTGTATGCC CGCCGGGATT TTGATTGGCG TTGTGGTTGC GATCTTCTCA
TTACAGCACG CCTTGCTGCC TGCTTATGCC TTGTTGCTGT TGATAGGTAT GCTGGGCGGC
TTTTTTGTGG TGCCGCTCAA CGCTTTGCTC CAGGAGCGCG GTAAGAAGAG CGTTGGCGCC
GGGAATGCCA TTGCCGTACA AAATCTGGGC GAGAATAGCG CCATGCTATT AATGCTGGGA
CTGTACTCGC TGGCGGTGCT GGTTGGCGTT CCGGCAGTGG CGATAGGTAT CGGCTTTGGC
GTGCTGTTCG CGCTGGCGAT CGCGGCGCTG TGGATCTGGC AGCGCCGGCA GGCATCATAC
TGA
 
Protein sequence
MSESVRTNTS IWSKGMLSVI VAQFLSAFGD NALLFATLAL LKAQFYPDWS QPVLQMVFVG 
AYILFAPFVG QIADSFAKGR VMMVANGLKL AGAAGICLGV NPFVGYTLVG IGAAAYSPAK
YGILGELTTG DKLVKANGLM EASTIAAILL GSVAGGVLAD WHVIAALVAC ALAYAGAVAA
NLFIPKLVAA RPGQSWRLSA MTRSFFSACV VLWRNGETRF SLVGTGLFWG AGVTLRFLLV
LWVPVALGIT DNATPTYLNA MVAVGIVVGA GAAAKLVTLE TVSRCMPAGI LIGVVVAIFS
LQHALLPAYA LLLLIGMLGG FFVVPLNALL QERGKKSVGA GNAIAVQNLG ENSAMLLMLG
LYSLAVLVGV PAVAIGIGFG VLFALAIAAL WIWQRRQASY