Gene SeD_A3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3326 
Symbol 
ID6872784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3205109 
End bp3205579 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID642786333 
Producthypothetical protein 
Protein accessionYP_002216972 
Protein GI198243863 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0233532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AACAGGGCTA TACGCTCATT GAAACGGTGG TCGCGATGTC GCTCATTATC 
ATTCTCAGCG CCACAGGACT TTATGGCTGG CAACGCTGGC AGCAGCAACA GCGCCTGTGG
CAAACCGCAT GTCAGGTGCG GGATTACCTG CTGCAACTTC GTGAGGATGC TCACTGGCAT
AACCGCGATC ACATTCTTCG CGTGGTCAGC GAAGGCGGTT CATGGTGCTT TGTCAGCTCT
GTTGCTACGC AAACATCGTG TACGCCATCT TCCCCCTTTG TGTTTACGCC CGACTGGCGT
GATGTCGTCC TTGCCGATAT CACGCCGTCG TTAGCCTTCT TTGGCTTGCG CAATACGGCA
TGGGCAGGGC ACATCGTACT GAAAAACGCT GCCGGAGAGT GGCGTCTGGT CGTCTCCTCC
TGGGGGCGAA TCAGGCTATG CGAGCGTAAC GAGGCCGCCA CGTGTCAATA A
 
Protein sequence
MKKQQGYTLI ETVVAMSLII ILSATGLYGW QRWQQQQRLW QTACQVRDYL LQLREDAHWH 
NRDHILRVVS EGGSWCFVSS VATQTSCTPS SPFVFTPDWR DVVLADITPS LAFFGLRNTA
WAGHIVLKNA AGEWRLVVSS WGRIRLCERN EAATCQ