Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3322 |
Symbol | recC |
ID | 6871941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3200459 |
End bp | 3203830 |
Gene Length | 3372 bp |
Protein Length | 1123 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786329 |
Product | exonuclease V subunit gamma |
Protein accession | YP_002216968 |
Protein GI | 198242903 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.056399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGGG TCTACCACTC CAATCGTCTG GATGTGCTGG AAGCGTTGAT GGAATTCATC GTCGAACGCG AGCGGCTGGA TGATCCCTTT GAACCAGAAA TGATTCTGGT ACAAAGCACG GGTATGGCGC AGTGGCTGCA GATGACCCTT TCACAAAAGT TTGGTATTGC GGCGAATATC GCTTTTCCGT TACCGGCGAG TTTTATCTGG GAGATGTTTG TCCGCGTGTT GCCGGATATC CCCAAAGAAA GCGCTTTCAG CAAACAAAGC ATGAGCTGGA AACTGATGAC CTTGCTGCCG CAGTTGCTGG ATAAGGATGA GTTTGTACTG CTGCGCCATT ATCTGACCGA CGACACCGAT AAACGCAAAC TCTTTCAGCT TTCCGCGCGC GCCGCCGACC TGTTCGATCA GTATCTGGTT TATCGGCCTG ACTGGCTTAC GCAGTGGGAA GCGGGAAAAA CCGTGGAAGG TCTGGGAGAG GCGCAAAACT GGCAGGCGCC GTTGTGGAAA GCATTGGTGG AATATACCGC CGCGCTGGGG CAGCCGCGCT GGCATCGCGC CAATCTCTAC CAACGCTTTA TTCAAACGCT GGAAAGCGCG ACCGCCTGCC CGCCAGGGTT GCCGTCCCGC GTTTTTATTT GCGGCATTTC CGCGTTACCG CCAGTGTATC TCAGAGCATT GCAGGCGCTG GGTAAACATA TTGAAATCCA TCTCCTTTTT ACTAATCCGT GTCGGTATTA CTGGGGGGAT ATTAAAGACC CAGCCTGGCT GGCAAAACTC ATGGCTCGCC AGCGTCGTCA CAGTTTTGAA GACCGTCATT TACCGTTGTT CCGTGAAAAC CAGAATCCGG AAGCCTTATT TAACAGCGAC GGTGAACAGG ATATCGGTAA TCCGCTACTG GCCTCATGGG GAAAACTGGG ACGGGATTAT ATCTACCTGC TATCTGAACT GGAAAACAGC CAGGAGCTGG ATGCGTTTGT TGATATTACG CCAGATAATC TTTTGCATCG GATTCAGGCG GACATCCTTG AACTGGAAAG CCATGCGGTG GCGGGCGTAA ATCTTGAGGA GTATTCGCGC AGCGACAATA AGCGTCTGCT CGATCCCGAG GATAACAGCC TCTCTTTTCA CGTTTGTCAC AGCCCGCAGC GCGAGGTGGA GATACTGCAC GATCGCCTGC TGGCGATGCT GGAAGCCGAT CCGACACTAA CGCCGCGCGA CATTATCGTT ATGGTGGCTG ATATTGACAG CTATAGCCCG TTTATCCAGG CGGTGTTTGG TAGCGCGCCA ACGGAGCGCT ATCTGCCTTA TGCCATTTCC GATCGGCGGG CGCGTCAGTC ACATCCGGTG TTACAGGCAT TTATCAGCCT ACTTTCGTTA CCGGACAGCC GCTTTGTCTC CGAGGATGTT CTGGCGTTGT TAGACGTACC GGTATTGGCT GCCCGCTTTA CGATCAACGA AGAAGGGTTG CGTTATTTGC GCTTGTGGGT CAATGAGTCA GGCATTCGCT GGGGAATTGA CGATGACAAC GTACGCGAGC TGGAACTTCC TGCCACGGGG CAGCATACGT GGCAATTTGG CCTGACGCGT ATGCTGCTGG GGTATGCGAT GGAAAGCGCC CAGGGCGAGT GGCAGTCGGT TCTGCCTTAT GACGAATCCA GCGGTCTGAT TGCTGAGCTG GTCGGGCATC TGGCTTCGCT GCTGATGCAG CTTAATATCT GGCGGCGCGG TCTGGCGCAG GAGCGACCGC TGGAAGAGTG GCTGCCCGTT TGTCGCGATA TGCTCAATGA TTTCTTCCTG CCCGATGCGG ACACGGAAGC GGCAATGACA TTGATTGAAC AGCAGTGGCA GGCCATTATC GCCGAAGGCG TCGCGGCGGA ATATGGCGAC GCGGTACCGA TTTCGCTACT GCGGGATGAA CTGGCGCAGC GTCTGGATCA GGAACGTATT AGCCAGCGCT TCCTGGCGGG CCCCATCAAT ATTTGTACGC TGATGCCGAT GCGTTCCATT CCGTTTAGAG TCGTTTGCCT GCTGGGAATG AACGACGGCG TATACCCGCG CCAGCTTGCG CCGTTGGGCT TTGACCTGAT GAGCCAAAAA CCCATGCGCG GGGATCGTAG CCGTCGCGAC GATGACCGCT ACCTGTTTCT GGAAGCGTTA ATCTCGGCGC AGCAGACGCT GTATATCAGC TACATCGGTC GCTCCATCCA GGATAATAGC GAACGCTTTC CCTCTGTACT GGTGCAAGAA TTGGTGGATT ACATCGGACA AAGCCACTAT TTGCCGGGCG ACGAAACGCT GACCTGTGAT GAGAGCGAAG CACGAGTCAA AGCGCATATT ACGCGTCTGC ATACCCGTAT GCCTTTTGAT GCGCAAAATT ACCAACCCGG CGAACAGCAA AGTTATGCCA GAGAGTGGTT GCCCGCGGCG AGTCAGTCGG GAAAAGCGCA TTCTGACTTT GTGCAGCCGC TTCCTTTTAC GATGCCGGAA ACATTGACTC TGGAAAGTCT GCAGCGTTTT TGGGCCCATC CGGTACGCGC ATTTTTTCAG ATGCGGCTTC AGGTTAATTT CCGCTCGGAA GAGAGTGAGA TTCCTGATGC GGAACCGTTT GAATTAGAGG GATTGACGCG ATATCAACTT AACCAACAGT TGCTCAATAC GCTGGTTGAA GAGGACGACG CCGAACGCTT GTTCCGCCGT TTCCGGGCTG CGGGAGAGTT GCCTTACGGC GCGTTTGGCG AAATATTCTG GGATGCGCAA TGTCAGGAGA TGCAGCAACT GGCAAGCCGG GTCATCGCCT GCCGTAAGCC GAGCCAAAGC CTGGAAGTGG ATCTGCTTTG CAATGGCGTT CAGCTAACCG GCTGGCTGCC GCAGGTACAG GAGGATGGAT TATTGCGCTG GCGTCCCGCT TTAATCAGCG TGGCGCAAGG TGTGCAACTT TGGCTGGAAC ACCTTGTCTA TTGTGCCAGC GGCGGGAGTG GCGAAAGTCG CCTGTTTTTG CGCAAAGAGG GAGAGTGGCG ATTTCCGCCT CTTGATAAAA CGCAGGCAAT GGCTTACCTG GCGCAACTGA TTGAAGGCTA CCGGGAAGGC ATGTCTTCTC CGCTATTGGT ACTGCCGGAA AGCGGCGGCG CATGGATAAA AGCCTGTTAT GACGCTGAAA ATGATGTCAT GTTAGACGAC GATGACACCT TACAGAAGGC CAGAACAAAG TTTCTACAGG CTTATGAAGG CAACATGATG GTGAGCGGCG AAGGCGAAGA TATCTGGTAT CAACGTCTTT GGCGTCAGCT GGAATCTGAA ACGTTGCAGG CTATCATTGC GCAGTCACGG CATTACCTGT TACCGCTGTT TCGTTTTAAT CAGTCTCGTT GA
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Protein sequence | MLRVYHSNRL DVLEALMEFI VERERLDDPF EPEMILVQST GMAQWLQMTL SQKFGIAANI AFPLPASFIW EMFVRVLPDI PKESAFSKQS MSWKLMTLLP QLLDKDEFVL LRHYLTDDTD KRKLFQLSAR AADLFDQYLV YRPDWLTQWE AGKTVEGLGE AQNWQAPLWK ALVEYTAALG QPRWHRANLY QRFIQTLESA TACPPGLPSR VFICGISALP PVYLRALQAL GKHIEIHLLF TNPCRYYWGD IKDPAWLAKL MARQRRHSFE DRHLPLFREN QNPEALFNSD GEQDIGNPLL ASWGKLGRDY IYLLSELENS QELDAFVDIT PDNLLHRIQA DILELESHAV AGVNLEEYSR SDNKRLLDPE DNSLSFHVCH SPQREVEILH DRLLAMLEAD PTLTPRDIIV MVADIDSYSP FIQAVFGSAP TERYLPYAIS DRRARQSHPV LQAFISLLSL PDSRFVSEDV LALLDVPVLA ARFTINEEGL RYLRLWVNES GIRWGIDDDN VRELELPATG QHTWQFGLTR MLLGYAMESA QGEWQSVLPY DESSGLIAEL VGHLASLLMQ LNIWRRGLAQ ERPLEEWLPV CRDMLNDFFL PDADTEAAMT LIEQQWQAII AEGVAAEYGD AVPISLLRDE LAQRLDQERI SQRFLAGPIN ICTLMPMRSI PFRVVCLLGM NDGVYPRQLA PLGFDLMSQK PMRGDRSRRD DDRYLFLEAL ISAQQTLYIS YIGRSIQDNS ERFPSVLVQE LVDYIGQSHY LPGDETLTCD ESEARVKAHI TRLHTRMPFD AQNYQPGEQQ SYAREWLPAA SQSGKAHSDF VQPLPFTMPE TLTLESLQRF WAHPVRAFFQ MRLQVNFRSE ESEIPDAEPF ELEGLTRYQL NQQLLNTLVE EDDAERLFRR FRAAGELPYG AFGEIFWDAQ CQEMQQLASR VIACRKPSQS LEVDLLCNGV QLTGWLPQVQ EDGLLRWRPA LISVAQGVQL WLEHLVYCAS GGSGESRLFL RKEGEWRFPP LDKTQAMAYL AQLIEGYREG MSSPLLVLPE SGGAWIKACY DAENDVMLDD DDTLQKARTK FLQAYEGNMM VSGEGEDIWY QRLWRQLESE TLQAIIAQSR HYLLPLFRFN QSR
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