| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3319 |
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| Symbol | recD |
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| ID | 6872197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3192023 |
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| End bp | 3193858 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642786326 |
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| Product | exonuclease V subunit alpha |
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| Protein accession | YP_002216965 |
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| Protein GI | 198243579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.940485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCC AGGAGCGGTT GCTGGAGGCC GTTGAACAAA AACTCTTACG GCCCATTGAT
GCCCAGTTTG CTTTAACCGT CGCCGGTAAC GACGATCCCG CCGTGACGCT GGCGGCAGCG
CTGCTTAGTC ATGACGCAGG TGAAGGTCAC GTGTGTCTGC CGTTGTCGCG TTTAACGTTA
ACGGAGGAGG CGCATCCCTT ACTGGTCGCC TGTATAAGCG AAACGGCTAC GCCAATCGAC
TGGAAAAAGC GGTTACTGGC GTCTGCGGCG GTTAGCTGCG GCGATAGCCC CGCGCCGTTA
ATTCTGTGCG GCGAGCGTCT CTACCTGAAT CGCATGTGGT GCAACGAACG TACGGTTGCG
CGCTTTTTTA ACGAGGTTAA CCAGGCCATC GCCGTAGATG AAGATCAGTT ATCCCGTATT
CTGGACGCGC TATTCCCTCC GACAGACGAG GTGAACTGGC AAAAGGTGGC CGCCGCCGTA
GCGCTAACTC GCCGTATCTC CGTGATTTCA GGCGGTCCCG GCACCGGTAA AACCACCACC
GTCGCGAAGC TGCTGGCGGC ATTAATTCAA ATGGCGGATG GCGAACGTTG CCGTATCCGG
CTGGCAGCGC CGACCGGGAA AGCGGCCGCA CGCCTGACGG AGTCGCTCGG CGCGGCGTTG
CGTCAGCTTC CACTTACCGA TGCGCAGAAA AAGCGTATAC CGGAGGACGC CAGTACGCTG
CACCGACTGC TAGGCGCACA GCCCGGCAGC CAGCGATTAC GCCATCATGC GGGCAACCCG
CTACATCTGG ACGTGCTGGT GGTCGATGAA GCATCAATGA TTGATTTGCC GATGATGTCA
CGTTTGATTG ACGCTCTGCC GCCGCACGGG CGGGTCATTT TTCTTGGCGA TCGCGATCAG
TTGGCATCCG TTGAGGCGGG CGCTGTGTTG GGCGATATTT GCGCCTATGT CAACGCAGGG
TTTACGGCGG AACGCGCCCG ACAGCTAAGT CGACTCACTG GTAGCGCCAT TCCGGCGGGG
GCCGGAACGC AAGCCGCATC TTTACGCGAT AGCCTCTGTT TGTTGCAAAA GAGCTATCGT
TTCGGCAGCG ATTCTGGCAT CGGCAAGCTG GCGGCGGCAA TTAACTGCGG CGACAGGTCG
GCAATCCAGG CTGTTTTTCA GCAGGGGTTT AGCGATATAG AGAAGCGTAC ATTGCAAAGC
AGCGACGATT ATGCCGGGAT GCTGGATGAA GCGCTGGCGG GCTATGGTCG CTACCTGCGG
TTGCTGCATG AAAAAGCGAC GCCGGAGGCA ATCCTTCAGG CTTTCAATGA GTATCAACTG
CTTTGTGCGC TGCGCGAAGG CCCATTTGGC GTGAGGGGAT TGAATGACCG CATTGAGCAG
GCGATGGTGC AGCAACGAAA AATTCAGCGG CACCCGCATT CTCGCTGGTA CGAAGGGCGT
CCGGTAATGA TTGCGCGCAA CGATAGCGCG TTGGGGCTAT TTAACGGCGA TATTGGTATT
GCGCTCGATC GCGGGCAGGG GTTACGCGTC TGGTTTGTGA TGCCGGACGG CACGATCAAG
TCCGTTCAGC CCAGCCGTCT GCCGGAACAT GATACAACCT GGGCGATGAC GGTACATAAA
TCACAGGGGT CTGAATTTGA TCACGCCGCG CTGATTTTAC CCAGCCAGCG TTCGCCGGTC
GTGACGCGGG AGCTGGTGTA TACCGCTGTT ACGCGAGCGC GGCGGCGGTT ATCGCTGTAT
GCCGATGAAC GGATCCTGGC AGGCGCGATT GTGACGCGTA CGGAGCGGCG CAGCGGGCTA
GCCACCTTAT TTGATGAAGT TAGTCGTACC GGATAA
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| Protein sequence | MTIQERLLEA VEQKLLRPID AQFALTVAGN DDPAVTLAAA LLSHDAGEGH VCLPLSRLTL
TEEAHPLLVA CISETATPID WKKRLLASAA VSCGDSPAPL ILCGERLYLN RMWCNERTVA
RFFNEVNQAI AVDEDQLSRI LDALFPPTDE VNWQKVAAAV ALTRRISVIS GGPGTGKTTT
VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGAAL RQLPLTDAQK KRIPEDASTL
HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPPHG RVIFLGDRDQ
LASVEAGAVL GDICAYVNAG FTAERARQLS RLTGSAIPAG AGTQAASLRD SLCLLQKSYR
FGSDSGIGKL AAAINCGDRS AIQAVFQQGF SDIEKRTLQS SDDYAGMLDE ALAGYGRYLR
LLHEKATPEA ILQAFNEYQL LCALREGPFG VRGLNDRIEQ AMVQQRKIQR HPHSRWYEGR
PVMIARNDSA LGLFNGDIGI ALDRGQGLRV WFVMPDGTIK SVQPSRLPEH DTTWAMTVHK
SQGSEFDHAA LILPSQRSPV VTRELVYTAV TRARRRLSLY ADERILAGAI VTRTERRSGL
ATLFDEVSRT G
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