| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3304 |
|---|
| Symbol | |
|---|
| ID | 6871830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3179743 |
|---|
| End bp | 3180453 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642786314 |
|---|
| Product | DNA-binding transcriptional activator FucR |
|---|
| Protein accession | YP_002216955 |
|---|
| Protein GI | 198245189 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGG CACGCCAACA AGCGATAGTC GATCTGCTGA TCAATCATAA AAGTCTGACC
ACCGAAGCGC TGGCCACCCG GCTTAACGTC AGTAAAGAGA CCATCCGCCG CGATCTCAGT
GAACTACAGA CGCAGGGAAA AGTGCTGCGT AATCACGGAC GAGCTAAATA TATTCATCGT
GAAAATCAGG ACAGCGGCGA TCCATTCCAT ATCCGCCTGA AAAGCCATTA TGCGCACAAA
GCCGATATTG CCCGTGAAGC GTTAGCGTGG ATAGAAGAAG GAATGACGAT TGCGCTGGAT
GCCAGTTCAA CCTGCTGGTA TCTGGCCCGC CAGTTGCCGG ATATTCCCAT TCAGGTTTTT
ACCAATAGCC ATCCTATCTG TCAGGAGCTG GGAAAACGCG AACGCATTAC GCTGATAAGT
TCCGGCGGCC AGCTTGAACG TAAATATGGC TGTTATGTTA ATCCGTCGCT TATCTCACAG
CTAAAATCGC TTGATATCGA TCTGTTCATC TTTTCCTGTG AGGGGATCGA CGGCGGCGGC
GATCTGTGGG ACTCCAATGC GATCAACGCC GATTTTAAAT CTATCCTGCT CAGGCGTGCC
TCGCAGGCTT TATTATTGAT TGATAAAAGT AAATTTAATC GTTCAGGAGA GGCGCGCATC
GGCCATCTGG ATGACGTGAC GCATATTGTT TCAGATGCGC CGCAGTCATA G
|
|---|
| Protein sequence | MKAARQQAIV DLLINHKSLT TEALATRLNV SKETIRRDLS ELQTQGKVLR NHGRAKYIHR
ENQDSGDPFH IRLKSHYAHK ADIAREALAW IEEGMTIALD ASSTCWYLAR QLPDIPIQVF
TNSHPICQEL GKRERITLIS SGGQLERKYG CYVNPSLISQ LKSLDIDLFI FSCEGIDGGG
DLWDSNAINA DFKSILLRRA SQALLLIDKS KFNRSGEARI GHLDDVTHIV SDAPQS
|
|---|
| |