Gene SeD_A3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3303 
Symbol 
ID6871968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3179263 
End bp3179685 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content54% 
IMG OID642786313 
Productfuscose operon protein FucU 
Protein accessionYP_002216954 
Protein GI198242575 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA CCATTTCACC GTTAATTTCC CCGACACTGC TCAAAGTGCT GGCCGAGATG 
GGCCACGGGG ACGAAATCAT TTTTTCCGAC GCTCACTTTC CCGCGCATAG CCTGGGCCCA
CAGGTGATTC GCGCCGATGG TCTTAGCGTC AGCGATCTAC TGCGGGCAAT TATTCCGCTC
TTTGAGCTGG ATAGCTACGC CCCGCCGCTG GTAATGATGG CCGCCGTGGA AGGCGACACG
CTCGACCCCA GCGTTGAAGC GCGCTATCGC GATGCTTTGT CATTAGAAGC GCCGTGCCCG
GATATCGTTC GTATCGACCG TTATGCGTTT TATGAGCGGG CGCAAAAAGC GTTTGCGATC
GTTATCACAG GTGAGTGCGC GAAGTACGGA AATATTCTTT TAAAAAAAGG GGTAACGCCG
TAA
 
Protein sequence
MLKTISPLIS PTLLKVLAEM GHGDEIIFSD AHFPAHSLGP QVIRADGLSV SDLLRAIIPL 
FELDSYAPPL VMMAAVEGDT LDPSVEARYR DALSLEAPCP DIVRIDRYAF YERAQKAFAI
VITGECAKYG NILLKKGVTP