Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3301 |
Symbol | fucI |
ID | 6874362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3175967 |
End bp | 3177742 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786311 |
Product | L-fucose isomerase |
Protein accession | YP_002216952 |
Protein GI | 198242481 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2407] L-fucose isomerase and related proteins |
TIGRFAM ID | [TIGR01089] L-fucose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCAGCTTACC GAAAATCGGT ATCCGCCCGG TGATTGATGG ACGTCGTATG GGCGTACGCG AGTCGCTCGA AGAGCAAACC ATGAACATGG CGAAAGCGAC GGCGGCGCTC ATCACCGAGA AAATGCGCCA CGCCTGTGGG GCACAAGTGG AGTGCGTCAT TGCGGATACC TGTATTGCCG GAATGGCGGA ATCCGCCGCC TGTGAAGAAA AATTCAGTAG CCAGAACGTG GGCGTGACCA TTACCGTTAC GCCGTGCTGG TGCTATGGCA GCGAAACCAT TGATATGGAC CCGATGCGTC CAAAAGCCAT CTGGGGCTTT AACGGCACAG AGCGTCCTGG GGCGGTTTAC CTTGCCGCGG CGCTGGCGGC GCACAGCCAG AAAGGCATTC CAGCGTTCTC CATTTATGGC CATGACGTGC AGGATGCCGA CGATACCTCC ATTCCTGCCG ACGTCGAAGA AAAACTGCTG CGTTTTGCGC GGGCAGGGTT AGCGGTAGCA AGCATGAAAG GCAAAAGCTA CCTCTCCGTC GGCGGCGTGT CGATGGGGAT CGCGGGTTCC ATTGTCGATC ATAACTTCTT TGAATCCTGG CTGGGCATGA AGGTGCAAGC GGTAGATATG ACCGAACTGC GCCGCCGTAT CGATCAAAAA ATTTATGATG AGGCCGAACT GGAGATGGCG CTGGCGTGGG CGGATAAAAA CTTCCGCTAC GGCGAAGATC AGAACGCCTC GCAGTATAAG CGCAATGAAG CCCAGAACCG CGCGGTGTTA AAAGAGAGCC TGCTGATGGC GATGTGTATT CGCGATATGA TGCAGGGCAA CAAGACGCTG GCGGACAAAG GGTTAGTTGA AGAATCGCTG GGCTACAACG CCATTGCCGC CGGCTTCCAG GGCCAGCGCC ACTGGACCGA TCAATACCCG AACGGCGATA CCGCCGAAGC GCTGCTCAAT AGTTCTTTTG ACTGGAACGG CGTACGCGAA CCGTTTGTCG TCGCCACCGA AAATGACAGT CTGAACGGCG TAGCGATGCT GTTCGGTCAT CAACTCACTG GTACCGCGCA GATATTCGCC GACGTGCGAA CCTACTGGTC GCCGGAAGCC GTAGAACGCG TCACCGGCCA GGCGCTCAGC GGCCTGGCGG AACACGGCAT TATTCACCTG ATTAATTCCG GTTCTGCCGC TCTGGACGGT GCCTGTAAAC AGCGCGACAG CGAAGGCAAG CCGACCATGA AACCGCACTG GGAAATCAGC CAACAAGAGG CGGATGCGTG TCTGGCGGCC ACCGAATGGT GCCCGGCGAT TCACGAATAC TTCCGCGGCG GCGGCTACTC ATCCCGTTTT CTGACCGAAG GCGGCGTGCC ATTCACCATG ACCCGCGTGA ATATCATCAA AGGCCTGGGA CCAGTACTGC AAATCGCCGA GGGCTGGAGC GTCGAACTGC CGAAAGCGAT GCACGATCAG CTTGATGCCC GCACCAACTC TACCTGGCCT ACCACCTGGT TTGCGCCGCG TCTTACCGGC AAAGGCCCGT TTACCGATGT CTATTCGGTG ATGGCGAACT GGGGCGCTAA CCACGGCGTA CTCACCATCG GCCATGTAGG GGCAGACTTT ATTACTCTCG CCGCGATGCT GCGTATCCCG GTATGTATGC ACAACGTGGA GGAGGCGAAG ATCTACCGTC CTTCCGCCTG GGCGGCTCAC GGTATGGATA TCGAAGGCCA GGATTATCGC GCCTGCCAAA ATTATGGCCC GCTGTATAAA CGTTAA
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Protein sequence | MKKISLPKIG IRPVIDGRRM GVRESLEEQT MNMAKATAAL ITEKMRHACG AQVECVIADT CIAGMAESAA CEEKFSSQNV GVTITVTPCW CYGSETIDMD PMRPKAIWGF NGTERPGAVY LAAALAAHSQ KGIPAFSIYG HDVQDADDTS IPADVEEKLL RFARAGLAVA SMKGKSYLSV GGVSMGIAGS IVDHNFFESW LGMKVQAVDM TELRRRIDQK IYDEAELEMA LAWADKNFRY GEDQNASQYK RNEAQNRAVL KESLLMAMCI RDMMQGNKTL ADKGLVEESL GYNAIAAGFQ GQRHWTDQYP NGDTAEALLN SSFDWNGVRE PFVVATENDS LNGVAMLFGH QLTGTAQIFA DVRTYWSPEA VERVTGQALS GLAEHGIIHL INSGSAALDG ACKQRDSEGK PTMKPHWEIS QQEADACLAA TEWCPAIHEY FRGGGYSSRF LTEGGVPFTM TRVNIIKGLG PVLQIAEGWS VELPKAMHDQ LDARTNSTWP TTWFAPRLTG KGPFTDVYSV MANWGANHGV LTIGHVGADF ITLAAMLRIP VCMHNVEEAK IYRPSAWAAH GMDIEGQDYR ACQNYGPLYK R
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