Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3300 |
Symbol | fucP |
ID | 6873716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3174619 |
End bp | 3175935 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642786310 |
Product | L-fucose transporter |
Protein accession | YP_002216951 |
Protein GI | 198244945 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAACA CAACAATACA AACACAGAGT TTTCGTGCTG TGGATGCAGA GCAAAGCAAA AGCAAGCGCT ACATTATTCC ATTCGCCTTA CTTTGCTCGC TATTTTTTCT GTGGGCCGTC GCCAATAATC TGAATGACAT TTTATTACCG CAGTTTCAAC AAGCTTTTAC GCTAACTAAC TTCCAGGCCG GACTTATTCA GTCAGCCTTT TATTTCGGTT ATTTCGTCAT TCCAATTCCC GCTGGGATTT TGATGAAAAA GCTCAGTTAT AAAGCAGGGA TTATCACCGG GCTTTTTTTG TATGCTGTTG GCGCCGCATT ATTCTGGCCT GCCGCCGAGA TAATGAATTA CACATTATTT TTAATTGGCC TGTTTATCAT CGCCGCCGGT TTAGGCTGCC TTGAAACTGC GGCCAATCCT TTTGTTACGG TATTAGGTCC AGAAAGCGGC GGACATTTCC GGCTTAATCT GGCGCAAACT TTTAACTCCT TTGGCGCTAT TATCGCCGTT GTGTTTGGGC AAAGCCTTAT TTTGTCTAAC GTGCCGCATC AATCACAAGA AGCGCTTGAT AAAATGACGC CGGATCAGCT TAGCGCCTAT AAACACAGCC TGGTGTTATC GGTACAAACG CCATACATGA TTATCGTCGC CATCGTATTA GTAGTTGCGC TGCTGATTAT GCTGACCAAA TTTCCGGCCC TGCAAAGTGA CGATCATAGC GATGCTAAAC AAAGCTCTTT CTTATCTTCT CTCTCCCGAC TCATCCGTAT TCGCCACTGG CGCTGGGCGG TGCTGGCGCA GTTCTGCTAC GTGGGGGCGC AAACCGCCTG CTGGAGCTAT CTGATCCGCT ACGCCATTGA GGAGATTCCT GGAATGACGC CCGGTTTCGC CGCCAACTAC CTGACCGGCA CGATGGTGTG CTTCTTTATC GGCCGTTTCA CCGGGACCTG GCTTATCAGC CGCTTCGCGC CGCATAAAGT GCTGGCCGCC TACGCCCTGT TTGCCATGCT CCTGTGTCTG ATTTCCGCCT TTAGCGGCGG ACATATCGGC CTGCTGGCGC TGACGTTGTG TAGCGCATTT ATGTCAATCC AGTACCCGAC CATCTTCTCG TTGGGTATCA AAAATCTGGG ACAGGACACT AAGTACGGCT CGTCTTTTAT CGTCATGACC ATTATTGGCG GCGGTATTGT CACGCCAGTA ATGGGCTTCG TTAGCGACGC CGCAGGCAAA ATCCCGACCG CCGAACTGGT TCCGGCATTG TGCTTTGCCG TCATCTTCAT TTTTGCCCGT TTCCGTTCAC AAGCGGCGAC AAACTGA
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Protein sequence | MGNTTIQTQS FRAVDAEQSK SKRYIIPFAL LCSLFFLWAV ANNLNDILLP QFQQAFTLTN FQAGLIQSAF YFGYFVIPIP AGILMKKLSY KAGIITGLFL YAVGAALFWP AAEIMNYTLF LIGLFIIAAG LGCLETAANP FVTVLGPESG GHFRLNLAQT FNSFGAIIAV VFGQSLILSN VPHQSQEALD KMTPDQLSAY KHSLVLSVQT PYMIIVAIVL VVALLIMLTK FPALQSDDHS DAKQSSFLSS LSRLIRIRHW RWAVLAQFCY VGAQTACWSY LIRYAIEEIP GMTPGFAANY LTGTMVCFFI GRFTGTWLIS RFAPHKVLAA YALFAMLLCL ISAFSGGHIG LLALTLCSAF MSIQYPTIFS LGIKNLGQDT KYGSSFIVMT IIGGGIVTPV MGFVSDAAGK IPTAELVPAL CFAVIFIFAR FRSQAATN
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