Gene SeD_A3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3296 
SymbolfucO 
ID6871052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3172252 
End bp3173400 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content56% 
IMG OID642786306 
ProductL-1,2-propanediol oxidoreductase 
Protein accessionYP_002216947 
Protein GI198245557 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID[TIGR02638] lactaldehyde reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA GAATGATTCT GAATGAAACG GCATGGTTTG GCCGGGGAGC GGTGGACGCA 
TTAACCGATG AGGTGACGCG CCGCGGTTAT CATAAAGCGC TGATTGTTAC CGATAAAACG
CTGGTGCAAT GCGGTGTGGT CGATAAAGTG ACAAGCAGAA TGGATGCCGC AGGGCTGGCG
TGGGAGATCT ATGCTGGCGT GATCCCTAAT CCTACGATTT CCGTTGTCCA GGAAGGGCTT
AAGGTCTTTA CCCAAAGCGG CGCGGACTAT CTCATCGCCA TTGGCGGCGG TTCTCCGCAG
GATACCTGCA AAGCGATCGG TATTATCAGT AACAATCCGG AATTTGCCGA TGTGCGCAGT
CTGGAAGGGC TATCGCCGAC CCGTAAACCC AGCGTGCCGA TTATGGCGAT CCCGACAACG
GCGGGAACCG CGGCGGAAGT CACTATCAAT TATGTGATTA CCGATGAAGA GAAACGGCGC
AAATTCGTTT GTGTCGATCC GCATGATATT CCGCAGGCGG CATTTATCGA TGCCGATATG
ATGGACGGTA TGCCGCCCGC GCTGAAAGCG GCAACGGGCG TGGATGCGCT AACCCATGCT
ATTGAAGGCT ATATTACCCG GGCCGCATGG GCGCTGACGG ATGCATTACA TATCAAAGCC
ATTGAGATTA TTGCTGGCGC GCTGCGCGGC GCCGTGGCCG GAGAAAAAGA GGCCGGTGAG
GCGATGGCGC TGGGGCAATA TGTTGCCGGG ATGGGGTTTT CCAATGTGGG GCTGGGGCTG
GTGCATGGGA TGGCGCATCC GCTGGGCGCG TTTTACAACA CGCCGCATGG CGTCGCGAAT
GCTATTTTGC TTCCGCATGT GATGCGTTTT AATGCCGGGT CTACCAACGA GAAATTCCGT
GATATCGCCC GGGCGATGGG GGTGAAGGTA GAAGGATTGA GTCTTGAAGA GGCACGTAAT
GCCGCAGTGG AAGCCGTATT TACGCTAAAT CGCGATGTGG GAATTCCGCT GCATTTGCGT
GATGTCGGCG TTCGAAAAGA GGATATCCCG GCGCTGGCGC AGGCGGCGTT CGATGATGTC
TGTACGGGCG GCAATCCGCG TGAAGCGAGT CTGGCGGACA TTGTCGAACT GTATCATATC
GCCTGGTAA
 
Protein sequence
MANRMILNET AWFGRGAVDA LTDEVTRRGY HKALIVTDKT LVQCGVVDKV TSRMDAAGLA 
WEIYAGVIPN PTISVVQEGL KVFTQSGADY LIAIGGGSPQ DTCKAIGIIS NNPEFADVRS
LEGLSPTRKP SVPIMAIPTT AGTAAEVTIN YVITDEEKRR KFVCVDPHDI PQAAFIDADM
MDGMPPALKA ATGVDALTHA IEGYITRAAW ALTDALHIKA IEIIAGALRG AVAGEKEAGE
AMALGQYVAG MGFSNVGLGL VHGMAHPLGA FYNTPHGVAN AILLPHVMRF NAGSTNEKFR
DIARAMGVKV EGLSLEEARN AAVEAVFTLN RDVGIPLHLR DVGVRKEDIP ALAQAAFDDV
CTGGNPREAS LADIVELYHI AW