Gene SeD_A3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3295 
Symbolxni 
ID6872815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3171405 
End bp3172160 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content55% 
IMG OID642786305 
Productexonuclease IX 
Protein accessionYP_002216946 
Protein GI198241843 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.609177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTC ATCTGCTTAT CGTCGACGCG CTCAATTTGA TTCGCCGTAT TCACGCCGTT 
CAGGGATCGC CCTGTGTGGA AACCTGCCAA CACGCGCTCG ATCAATTGAT TATCCACAGC
CAGCCAACCC ATGCCGTAGC GGTATTTGAT GACGACGCGC GCAGCAGCGG CTGGCGTCAT
CAGCGTTTAC CGGACTACAA AGCAGGACGT CCGCCGATGC CTGACGATTT ACATAATGAA
ATGCCCGCCC TACGCGCCGC ATTTGAACAG CGCGGCATAC GCTGTTGGGC ATCAGACGGT
AACGAAGCGG ACGATCTGGC GGCGACGCTG GCGCTAAAAG TTACCGAAGC CGGACACCAG
GCAACCATTG TGTCAACCGA TAAAGGCTAT TGCCAGTTGC TCTCTCCGGG ATTGCGCATT
CGCGACTACT TCCAGAAACG CTGGCTGGAC GCGCCGTTTA TTGAAAAAGA GTTTGGCGTA
CTTCCCCGGC AGTTGCCGGA TTACTGGGGT CTGGCAGGAA TCAGCAGTTC GAAAGTCCCC
GGCGTTGCCG GTATCGGCCC CAAAAGCGCG ACCCAGCTGT TGATTCAGTT TCAAAATCTG
GAGGGAATTT ACGCCCATCT GGACGAGGTG CCGGAAAAGT GGCGCAAAAA GCTTGAGACG
CATAAAGAAA TGGCATTTCT TTGCCGCGAT ATTGCACGTC TGCAAACCGA TTTACATATC
GACGGAAACT TACAGCAGCT ACGGCTGGCG CGGTAG
 
Protein sequence
MAAHLLIVDA LNLIRRIHAV QGSPCVETCQ HALDQLIIHS QPTHAVAVFD DDARSSGWRH 
QRLPDYKAGR PPMPDDLHNE MPALRAAFEQ RGIRCWASDG NEADDLAATL ALKVTEAGHQ
ATIVSTDKGY CQLLSPGLRI RDYFQKRWLD APFIEKEFGV LPRQLPDYWG LAGISSSKVP
GVAGIGPKSA TQLLIQFQNL EGIYAHLDEV PEKWRKKLET HKEMAFLCRD IARLQTDLHI
DGNLQQLRLA R