| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3276 |
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| Symbol | relA |
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| ID | 6871216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3150630 |
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| End bp | 3152864 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642786289 |
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| Product | GDP/GTP pyrophosphokinase |
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| Protein accession | YP_002216930 |
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| Protein GI | 198244188 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00140611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.0304818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCGG TAAGAAGTGC ACATATTAAT AAAGCTGGTG AATTTGATCC GAAGAAGTGG
ATCGCAAGCC TGGGAATTTC CAGCCAGCAG TCGTGTGAGC GCTTAGCCGA AACCTGGGCG
TATTGCCTGC AACAGACACA AGGACATCCG GATGCGGATC TGTTGCTGTG GCGTGGCGTG
GAGATGGTAG AAATTCTTTC CACGCTGAGT ATGGATATCG ACACGCTGCG GGCGGCGCTA
CTGTTCCCTC TGGCCGACGC CAACGTAGTC AGCGAAGATG TACTGCGCGA AAGCGTCGGC
AAATCTATCG TTACCCTGAT TCATGGCGTG CGCGATATGG CGGCGATCCG TCAGCTAAAC
GCCACTCATA ACGACTCTGT TTCTTCGGAG CAGGTTGATA ACGTCCGTCG AATGTTATTG
GCGATGGTGG ATGATTTCCG CTGCGTGGTG ATCAAACTGG CCGAGCGAAT CGCTCATTTG
CGCGAAGTGA AAGAGGCGCC GGAAGATGAG CGCGTGCTGG CGGCGAAAGA ATGTACCAAC
ATCTATGCGC CGCTCGCTAA TCGTCTGGGC ATCGGGCAAC TGAAGTGGGA ACTGGAAGAC
TACTGTTTCC GCTACCTGCA TCCGGCGGAA TACAAACGCA TCGCCAAACT GCTGCATGAG
CGCCGTCTCG ATCGCGAACA TTACATCGAA GAGTTTGTTG GACATCTGCG CGCCGAAATG
AAAAACGAAG GCGTGCAGGC GGAGGTCTAC GGACGACCAA AACATATTTA TAGCATCTGG
CGCAAAATGC AGAAAAAGCA TCTGGCGTTT GATGAACTCT TTGACGTGCG CGCCGTGCGT
ATTGTCGCTG AACGTCTGCA GGACTGCTAC GCCGCGTTGG GGATAGTGCA TACGCACTAT
CGTCACCTGC CGGATGAATT CGATGATTAT GTCGCTAACC CGAAACCGAA CGGTTACCAG
TCTATCCACA CCGTGGTCCT GGGACCGGGC GGTAAAACCG TTGAGATCCA GATCCGTACC
AAACAGATGC ATGAAGACGC CGAACTGGGC GTGGCGGCAC ACTGGAAGTA TAAAGAAGGC
GCCGCGTCCG GCGGCGTGCG CTCCGGTCAT GAAGACAGAA TTGCGTGGCT GCGTAAGCTG
ATCGCCTGGC AGGAAGAGAT GGCCGATTCC GGCGAAATGC TGGATGAAGT GCGCAGCCAG
GTGTTTGACG ATCGGGTCTA CGTTTTTACG CCAAAAGGCG ACGTGGTTGA CTTGCCTGCC
GGATCTACGC CGCTCGATTT TGCTTACCAC ATCCACAGCG ATGTTGGGCA CCGCTGCATT
GGCGCTAAAA TCGGCGGCCG TATTGTGCCA TTCACCTATC AGTTGCAGAT GGGTGATCAA
ATTGAAATTA TCACTCAGAA GCAGCCGAAT CCCAGCCGCG ACTGGCTGAA TCCAAACCTG
GGCTATGTGA CGACCAGCCG CGGACGCTCG AAAATTCACG CCTGGTTCCG CAAGCAGGAT
CGTGACAAAA ATATCCAGGC TGGACGGCAG ATCCTCGACG ATGAGCTGGC GCATTTGGGG
ATTAGCCTGA AAGAGGCCGA AAAACATCTG CTGCCGCGCT ACAACTTTAA TGAGCTGGAA
GAGTTGCTGG CGGCGATAGG CGGCGGCGAT ATCCGTCTTA ATCAGATGGT GAATTTTCTG
CAATCGCAGT TCAATAAGCC GAGTGCGGAG GAGCAGGATG CAGCGGCGCT GAAACAGCTT
CAGCAAAAAA CATACGCGCC GCAAAATCGT CGTAAAGACG ACGGGCGCGT GGTGGTGGAA
GGGGTTGGTA ACCTGATGCA CCACATTGCC CGCTGCTGCC AGCCGATTCC TGGCGATGAA
ATTGTCGGCT TCATTACTCA GGGGCGGGGA ATTTCCGTGC ACCGGGCCGA CTGCGAACAG
CTGGCGGAAC TGCGCTCCCA TGCGCCGGAG CGGATCGTAG AGGCGGTATG GGGCGAAAGC
TACTCGGCGG GATATTCGCT GGTGGTGCGC GTCCAGGCCA ACGATCGCAG CGGCTTGCTG
CGCGATATCA CCACTATTCT GGCTAACGAA AAAGTCAACG TGCTGGGCGT CGCCAGCCGC
AGCGACATTA AACAGCAGAT CGCCACCATT GATATGACCA TCGAGATCTA CAACCTGCAG
GTGCTGGGCC GCGTGCTCGG TAAGCTGAAC CAGGTGCCGG ATGTGATTGA TGCACGGCGA
CTGCACGGGG GGTAA
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| Protein sequence | MVAVRSAHIN KAGEFDPKKW IASLGISSQQ SCERLAETWA YCLQQTQGHP DADLLLWRGV
EMVEILSTLS MDIDTLRAAL LFPLADANVV SEDVLRESVG KSIVTLIHGV RDMAAIRQLN
ATHNDSVSSE QVDNVRRMLL AMVDDFRCVV IKLAERIAHL REVKEAPEDE RVLAAKECTN
IYAPLANRLG IGQLKWELED YCFRYLHPAE YKRIAKLLHE RRLDREHYIE EFVGHLRAEM
KNEGVQAEVY GRPKHIYSIW RKMQKKHLAF DELFDVRAVR IVAERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTVEIQIRT KQMHEDAELG VAAHWKYKEG
AASGGVRSGH EDRIAWLRKL IAWQEEMADS GEMLDEVRSQ VFDDRVYVFT PKGDVVDLPA
GSTPLDFAYH IHSDVGHRCI GAKIGGRIVP FTYQLQMGDQ IEIITQKQPN PSRDWLNPNL
GYVTTSRGRS KIHAWFRKQD RDKNIQAGRQ ILDDELAHLG ISLKEAEKHL LPRYNFNELE
ELLAAIGGGD IRLNQMVNFL QSQFNKPSAE EQDAAALKQL QQKTYAPQNR RKDDGRVVVE
GVGNLMHHIA RCCQPIPGDE IVGFITQGRG ISVHRADCEQ LAELRSHAPE RIVEAVWGES
YSAGYSLVVR VQANDRSGLL RDITTILANE KVNVLGVASR SDIKQQIATI DMTIEIYNLQ
VLGRVLGKLN QVPDVIDARR LHGG
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