Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3269 |
Symbol | |
ID | 6871217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3143498 |
End bp | 3144085 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642786282 |
Product | putative fimbrial subunit |
Protein accession | YP_002216923 |
Protein GI | 198242506 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0251275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAT CTCATTTTTG TAAACTGGCA GTAACTGCAT CTTTAGTTAT GGGAATTGTC TCCGGCGCTC AAGCCGCGGG TAGCAACACA GCGAAGGTCA CTTTCCTTGG TAATATTGTT GACTCCCCCT GCTCCGTCAC ATTGGATACG GAAGATCAAA CAGTCAATAT GGGTTCAAGT ATCGGTAATG GCACGCTGAG TAATGGTAAA ACGACCATCA ACAATGCCCG TACCTTTCAT ATCGATCTTG AGGGTTGTAC CTGGGCTACC GAGAAAAATA TGAATGTGGT ATTCACTACA GGTAGTGGAA CCACAGCGGC TACAGGCGCC ACGGATAATC TCGCGCTGAT GAAGACTGAC GGCACTGGCG CTATTAGCAA CGTAAGCCTG GCAATCGGCG ATGCTGGCAA AAACAATATC AAACTGGGCG ATACCTATAC ACAGGCCATT GCGGACCTGG ACGGAGATAC CATTCTTGAT GAGAAGCAAA GCCTGAATTT CACCGCCTGG CTGGTTGGCG CAGCAACCGG TACCGTGGGC ACAGGTGAAT TCAGCAGCGC CGCCAACGTC ACTATCTCTT ACCTGTAA
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Protein sequence | MKSSHFCKLA VTASLVMGIV SGAQAAGSNT AKVTFLGNIV DSPCSVTLDT EDQTVNMGSS IGNGTLSNGK TTINNARTFH IDLEGCTWAT EKNMNVVFTT GSGTTAATGA TDNLALMKTD GTGAISNVSL AIGDAGKNNI KLGDTYTQAI ADLDGDTILD EKQSLNFTAW LVGAATGTVG TGEFSSAANV TISYL
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