Gene SeD_A3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3265 
Symbol 
ID6872284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3138039 
End bp3138710 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID642786278 
Productradical SAM domain-containing protein 
Protein accessionYP_002216919 
Protein GI198243481 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000025013 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.189038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACC CGATTAACGA GATGTTCCAG ACTCTACAAG GCGAGGGTTA TTTTACCGGC 
GTCCCCGCTA TTTTTATTCG TTTACAGGGA TGTCCGGTCG GCTGTGCCTG GTGTGATACT
AAGCATACCT GGGATAAACT GAGCGATCGG GAAGTGTCTC TGTTCAGCAT TCTGGCAAAA
ACCAAAGAGA GCGACAAATG GGGTGCTGCG AGCAGTGAAG ACTTGCTGGC AGTAATTAAC
CGTCAGGGCT ATACCGCGCG TCACGTTGTC ATCACCGGTG GCGAACCCTG TATTCACGAC
CTCATGCCGC TCACCGATCT GCTTGAAAAG AGTGGTTTTA GTTGCCAGAT TGAAACCAGC
GGGACGCATG AAGTGCGCTG TACGCCTAAC ACCTGGGTCA CGGTTTCACC AAAAGTGAAT
ATGCGCGGGG GATATGACGT GCTTTCCCAG GCGCTGGAGC GCGCCAATGA AATCAAGCAT
CCCGTTGGGC GAGTTCGTGA TATTGAGGCG CTGGATGAAC TGTTAGCCAC GTTGAGCGAT
GATAAACCGC GCGTGATTGC TTTGCAGCCC ATTAGCCAGA AAGAAGACGC GACGCGTCTG
TGTATTGAAA CGTGTATTGC ACGTAACTGG CGGCTGTCTA TGCAAACGCA TAAATATTTA
AATATCGCCT GA
 
Protein sequence
MQYPINEMFQ TLQGEGYFTG VPAIFIRLQG CPVGCAWCDT KHTWDKLSDR EVSLFSILAK 
TKESDKWGAA SSEDLLAVIN RQGYTARHVV ITGGEPCIHD LMPLTDLLEK SGFSCQIETS
GTHEVRCTPN TWVTVSPKVN MRGGYDVLSQ ALERANEIKH PVGRVRDIEA LDELLATLSD
DKPRVIALQP ISQKEDATRL CIETCIARNW RLSMQTHKYL NIA