Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3263 |
Symbol | |
ID | 6873938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3136513 |
End bp | 3137310 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786276 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_002216917 |
Protein GI | 198245034 |
COG category | [R] General function prediction only |
COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0656446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.191577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTTAA GGATCAGGGT ATTGCTCGAA AATCATAAGG GAGCTGGAGC GGATAAATCG TTGAAGGCCC GGCCAGGATT AAGCCTGTTA GTCGAGGATG AGTCTACGTC GATCTTGTTC GATACCGGCC CTGATGGCAG TTTTATGCAA AACGCGTTGG CGATGGGGAT CGACCTGTCC GATGTGTCTG CTGTGGTGCT TTCGCATGGT CATTACGATC ATTGCGGCGG CGTGCCGTGG CTTCCTGATA ACAGTCGAAT CATCTGCCAT CCCGATATTG CGCGCGAACG TTATGCGGCA ATGACTTTTC TCGGTATTAC CCGAAAAATA AAAAAATTGT CGTGTGAGGT GGACTATTCA CGCTACCGAA TGATGTACAC GCGTGACCCC CTGCCGATTG GCAAAAACTT TATCTGGTCA GGGGAAATAC CGGTGGTTGC GCCTGAAGCC TACGGCATTT TTGGCGGCCA CGATGCGGAG CCGGACTCCA TTTTGGATGA GGGCGTACTG ATTTACCAAT CGACAAAAGG ATTAGTCATC ATTACGGGAT GCGGGCATCG GGGGATCGCA AATATTGTCC GGCACTGTCA GAACATTACC GGTATAAAGC GGATTTACGC GCTTGTCGGC GGATTTCATC TCCGCTGCGC ATCACCGTTC ACGCTGTGGC GAGTCAGGCG CTTTCTGCAA GAACAAAAAC CTGAAAAACT ATGCGGTTGT CACTGTACAG GGGCCTGGGG GCGGTTGTGG CTACCGGAAA TAACCGCACC TGCAACCGGT GATGTGCTGC GCTTTTAA
|
Protein sequence | MALRIRVLLE NHKGAGADKS LKARPGLSLL VEDESTSILF DTGPDGSFMQ NALAMGIDLS DVSAVVLSHG HYDHCGGVPW LPDNSRIICH PDIARERYAA MTFLGITRKI KKLSCEVDYS RYRMMYTRDP LPIGKNFIWS GEIPVVAPEA YGIFGGHDAE PDSILDEGVL IYQSTKGLVI ITGCGHRGIA NIVRHCQNIT GIKRIYALVG GFHLRCASPF TLWRVRRFLQ EQKPEKLCGC HCTGAWGRLW LPEITAPATG DVLRF
|
| |