Gene SeD_A3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3263 
Symbol 
ID6873938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3136513 
End bp3137310 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content52% 
IMG OID642786276 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_002216917 
Protein GI198245034 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0656446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.191577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAA GGATCAGGGT ATTGCTCGAA AATCATAAGG GAGCTGGAGC GGATAAATCG 
TTGAAGGCCC GGCCAGGATT AAGCCTGTTA GTCGAGGATG AGTCTACGTC GATCTTGTTC
GATACCGGCC CTGATGGCAG TTTTATGCAA AACGCGTTGG CGATGGGGAT CGACCTGTCC
GATGTGTCTG CTGTGGTGCT TTCGCATGGT CATTACGATC ATTGCGGCGG CGTGCCGTGG
CTTCCTGATA ACAGTCGAAT CATCTGCCAT CCCGATATTG CGCGCGAACG TTATGCGGCA
ATGACTTTTC TCGGTATTAC CCGAAAAATA AAAAAATTGT CGTGTGAGGT GGACTATTCA
CGCTACCGAA TGATGTACAC GCGTGACCCC CTGCCGATTG GCAAAAACTT TATCTGGTCA
GGGGAAATAC CGGTGGTTGC GCCTGAAGCC TACGGCATTT TTGGCGGCCA CGATGCGGAG
CCGGACTCCA TTTTGGATGA GGGCGTACTG ATTTACCAAT CGACAAAAGG ATTAGTCATC
ATTACGGGAT GCGGGCATCG GGGGATCGCA AATATTGTCC GGCACTGTCA GAACATTACC
GGTATAAAGC GGATTTACGC GCTTGTCGGC GGATTTCATC TCCGCTGCGC ATCACCGTTC
ACGCTGTGGC GAGTCAGGCG CTTTCTGCAA GAACAAAAAC CTGAAAAACT ATGCGGTTGT
CACTGTACAG GGGCCTGGGG GCGGTTGTGG CTACCGGAAA TAACCGCACC TGCAACCGGT
GATGTGCTGC GCTTTTAA
 
Protein sequence
MALRIRVLLE NHKGAGADKS LKARPGLSLL VEDESTSILF DTGPDGSFMQ NALAMGIDLS 
DVSAVVLSHG HYDHCGGVPW LPDNSRIICH PDIARERYAA MTFLGITRKI KKLSCEVDYS
RYRMMYTRDP LPIGKNFIWS GEIPVVAPEA YGIFGGHDAE PDSILDEGVL IYQSTKGLVI
ITGCGHRGIA NIVRHCQNIT GIKRIYALVG GFHLRCASPF TLWRVRRFLQ EQKPEKLCGC
HCTGAWGRLW LPEITAPATG DVLRF