Gene SeD_A3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3262 
Symbol 
ID6875490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3136063 
End bp3136425 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID642786275 
Product6-pyruvoyl tetrahydrobiopterin synthase 
Protein accessionYP_002216916 
Protein GI198244543 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.872797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.157447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CGTTGTATAA AGATTTCACC TTTGAAGCCG CTCACCGCCT GCCTCACGTG 
CCTGAAGGGC ATAAGTGCGG CCGCCTGCAC GGACACTCGT TTATGGTGCG TCTCGAAATT
ACCGGTGAAG TCGATCCGCA TACCGGTTGG ATTATGGATT TCGCGGATCT CAAAGCGGCG
TTTAAACCGA CTTACGATCG TCTTGATCAC TACTATCTGA ATGATATTCC AGGGCTGTCC
AATCCCACCA GCGAAGTGCT GGCAAAATGG ATTTGGGATC AGGTTAAGCC CGTCGTGCCG
CTACTGAGCG CCGTGATGGT GAAAGAGACC TGTACAGCCG GCTGCGTCTA TCGCGGCGAA
TAA
 
Protein sequence
MSTTLYKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IMDFADLKAA 
FKPTYDRLDH YYLNDIPGLS NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCVYRGE