Gene SeD_A3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3260 
SymbolcysJ 
ID6871356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3133840 
End bp3135639 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content57% 
IMG OID642786273 
Productsulfite reductase subunit alpha 
Protein accessionYP_002216914 
Protein GI198242803 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.25406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGGCTCCACT GACTGGGTTG CTTCCGCTTA ATCCGGAGCA ACTGGCGCGC 
CTTCAGGCCG CGACAACCGA CCTTACTCCC GAACAGCTTG CCTGGGTCTC CGGCTATTTT
TGGGGCGTAC TGAACCCGCG CTCAGGCGTT GTTGCCGTCA CGCCTGTTCC TGAGCGGAAG
ATGCCGGGGG TTACGCTTAT CTCCGCTTCG CAAACCGGCA ATGCGCGTCG TGTGGCGGAA
GCGCTGCGTG ATGATCTGCT GGCGGCCAAC CTTAATGTGA CACTGGTGAA CGCCGGCGAC
TACAAATTCA AACAGATTGC CAGTGAAAAA CTGTTGGTGA TAGTGACGTC CACCCAGGGA
GAAGGCGAGC CGCCGGAAGA GGCCGTCGCG CTGCATAAAT TCCTGTTCTC CAAAAAAGCG
CCGAAACTGG AAAACACCGC TTTTGCCGTG TTTAGCCTCG GCGACACCTC TTATGAATTT
TTCTGCCAGT CCGGAAAAGA TTTCGACAGC AAACTGGCGG AACTGGGCGG TGAACGTCTG
CTCGACCGTG TCGATGCTGA CGTTGAATAT CAGGCAGCTG CCAGCGAATG GCGCGCCCGC
GTGGTTGATG TTCTGAAGTC TCGCGCACCT GTCGCGGCAC CTTCGCAATC CGTCGCTACT
GGCGCGGTAA ACGACATCCA CACCAGCCCC TATACTAAAG ACGCGCCGCT GATCGCGACC
CTCTCCGTGA ATCAGAAAAT CACCGGTCGC AACTCGGAAA AAGATGTGCG TCATATTGAG
ATTGATTTAG GCGACTCCGG CCTGCGCTAT CAGCCGGGCG ATGCGCTGGG CGTCTGGTAT
CAGAACGATC CGGCTCTGGT GAAGGAGCTG GTTGAGTTGC TGTGGCTGAA AGGCGATGAG
CCGGTGACGG TTGATGGTAA AACCCTGCCG CTCGCCGAAG CGCTGGAGTG GCACTTCGAG
CTGACGGTGA ATACCGCCAA CATTGTTGAG AACTACGCGA CCCTGACGCG CAGTGAGTCG
CTGTTGCCAT TAGTGGGCGA CAAAGCGCAG CTCCAGCACT ACGCCGCGAC CACGCCCATT
GTTGATATGG TGCGTTTCTC TCCGGCGCAG CTCGACGCTG AAGCATTAAT CGGCCTGCTG
CGTCCGCTGA CGCCGCGTCT GTACTCCATC GCCTCCGCGC AGGCGGAAGT CGAAAGCGAA
GTACACGTAA CCGTCGGCGT CGTGCGCTAC GATATTGAAG GCCGCGCCCG CGCGGGTGGT
GCTTCCAGCT TCCTCGCCGA CCGCGTGGAA GAAGAGGGCG AAGTGCGCGT CTTTATTGAA
CACAACGATA ATTTCCGCCT GCCAGCGAAT CCGCAGACTC CGGTGATTAT GATTGGCCCA
GGTACGGGTA TCGCGCCGTT CCGCGCCTTT ATGCAGCAAC GCGCCGCCGA CGGTGCGGAA
GGCAAGAACT GGCTGTTCTT CGGTAACCCG CACTTCACCG AAGACTTCCT TTATCAGGTT
GAATGGCAGC GTTACGTGAA AGAAGGTGTG CTGAACCGGA TCGATCTGGC CTGGTCCCGC
GATCAAAAAG AAAAAATTTA CGTACAAGAC AAGCTGCGTG AACAGGGTGC CGAGCTGTGG
CGCTGGATCA ATGATGGCGC GCATATTTAT GTCTGCGGCG ATGCCAGGCG CATGGCCGCA
GATGTCGAAA AAGCATTGCT GGAAGTGATC GCTGAATTCG GCGGTATGGA CCTCGAATCG
GCAGATGAAT ATTTAAGTGA GCTGCGCGTC GAGCGCCGTT ATCAGCGAGA TGTCTACTAA
 
Protein sequence
MTTPAPLTGL LPLNPEQLAR LQAATTDLTP EQLAWVSGYF WGVLNPRSGV VAVTPVPERK 
MPGVTLISAS QTGNARRVAE ALRDDLLAAN LNVTLVNAGD YKFKQIASEK LLVIVTSTQG
EGEPPEEAVA LHKFLFSKKA PKLENTAFAV FSLGDTSYEF FCQSGKDFDS KLAELGGERL
LDRVDADVEY QAAASEWRAR VVDVLKSRAP VAAPSQSVAT GAVNDIHTSP YTKDAPLIAT
LSVNQKITGR NSEKDVRHIE IDLGDSGLRY QPGDALGVWY QNDPALVKEL VELLWLKGDE
PVTVDGKTLP LAEALEWHFE LTVNTANIVE NYATLTRSES LLPLVGDKAQ LQHYAATTPI
VDMVRFSPAQ LDAEALIGLL RPLTPRLYSI ASAQAEVESE VHVTVGVVRY DIEGRARAGG
ASSFLADRVE EEGEVRVFIE HNDNFRLPAN PQTPVIMIGP GTGIAPFRAF MQQRAADGAE
GKNWLFFGNP HFTEDFLYQV EWQRYVKEGV LNRIDLAWSR DQKEKIYVQD KLREQGAELW
RWINDGAHIY VCGDARRMAA DVEKALLEVI AEFGGMDLES ADEYLSELRV ERRYQRDVY