| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3249 |
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| Symbol | cas1 |
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| ID | 6873274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3121641 |
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| End bp | 3122561 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642786264 |
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| Product | crispr-associated protein Cas1 |
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| Protein accession | YP_002216905 |
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| Protein GI | 198243044 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.222064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTTCG TACCGCTCAA CCCGATCCCG TTAAAAGATC GAACCTCGAT GATCTTCCTC
CAGTACGGTC AAATTGACGT GCTGGATGGG GCATTCGTGC TGATCGATAA AACGGGAGTC
CGCACGCATA TTCCCGTCGG TTCGGTCGCT TGTATCATGC TGGAACCGGG AACGCGGGTT
TCCCATGCGG CAGTGCATTT AGCATCAACG GTCGGCACCC TGTTGGTATG GGTGGGCGAG
GCGGGAGTGC GGGTCTATTC CTCCGGACAA CCCGGTGGCG CACGAGCCGA TAAGTTGCTT
TATCAGGCAA AGCTGGCGTT AGATGATGAC CTGCGGCTTA AAGTAGTCCG CAAAATGTAT
GAACTGCGTT TTCGTGAGCC GCCTCCCGCC CGTCGTTCCG TTGAGCAACT GCGCGGTATT
GAAGGATCCC GTGTGCGGGC GACCTATGCA TTACTGGCGA AGCAGTATGG CGTGAAATGG
CATGGTCGTA ACTATGATCC GAAAGACTGG GAGAAGGGGG ATGTCGTCAA CCGATGTATT
AGCGCGGCGA CATCGTGCCT GTACGGGATT TCAGAAGCGG CTATCCTGGC GGCGGGATAT
GCGCCGGCTA TCGGTTTTAT CCATAGCGGT AAGCCGCTTT CTTTTGTTTA TGACATTGCC
GATATCATCA AATTTGAATC GGTGGTGCCC AAAGCATTTG AGATCGCCGC TCGTCACCCG
GCGGAACCTG ATAAAGAAGT GCGCCTGGCC TGCCGGGATA TTTTTCGCAG TTCGAAGCTG
ACCGGAAAAT TGATCCCGCT GATCGAAGAG GTGCTCGCTG CCGGTGAAAT TGAACCACCT
CAGCCTGCGC CGGATATGCT GCCGCCAGCA ATACCGGAAC CTGAATCACT GGGTGATAGC
GGCCATCGGG GGCATGGTTG A
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| Protein sequence | MTFVPLNPIP LKDRTSMIFL QYGQIDVLDG AFVLIDKTGV RTHIPVGSVA CIMLEPGTRV
SHAAVHLAST VGTLLVWVGE AGVRVYSSGQ PGGARADKLL YQAKLALDDD LRLKVVRKMY
ELRFREPPPA RRSVEQLRGI EGSRVRATYA LLAKQYGVKW HGRNYDPKDW EKGDVVNRCI
SAATSCLYGI SEAAILAAGY APAIGFIHSG KPLSFVYDIA DIIKFESVVP KAFEIAARHP
AEPDKEVRLA CRDIFRSSKL TGKLIPLIEE VLAAGEIEPP QPAPDMLPPA IPEPESLGDS
GHRGHG
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