Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3240 |
Symbol | ispD |
ID | 6873507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3115235 |
End bp | 3115945 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642786255 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_002216896 |
Protein GI | 198244815 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA CTTTATTGGA CGTTTGCGCC GTGGTGCCGG CGGCCGGATT TGGCCGCCGA ATGCAAACAG AATGTCCTAA GCAGTATCTC TCAATCGGTA ATAAAACCAT TCTGGAGCAC TCAGTTCATG CGCTGCTGGC GCATCCTCGG GTGACACGCG TTGTTATTGC TATCAGCCCT GGCGATCATC GCTTTGCCCA ACTTCCGCTG GCGAATCATC CGCAAATCAC CGTTGTGGAT GGCGGCAACG AACGCGCTGA TTCTGTTTTG GCCGGGTTGC AGGCCGTTGC AAAGGCGCAG TGGGTGCTGG TGCACGACGC GGCAAGACCC TGTTTGCATC AGGATGACCT TGCGCGGTTG CTGACCATCA GCGAAAACAG CCGGGTCGGC GGTATCCTCG CCAGTCCGGT GCGCGACACC ATGAAACGCG GCGAACCGGG GAAGAACGCT ATTGCCCATA CCGTAGAGCG CGCCGATTTA TGGCACGCGC TCACCCCGCA GTTTTTCCCC CGCGAACTCT TGCACGATTG TCTGACGCGT GCGCTGAATG AAGGCGCGAC CATCACCGAC GAAGCGTCAG CGCTGGAATA TTGTGGTTTT CATCCGGCGC TGGTAGAAGG TCGCGCGGAT AACATCAAGG TCACCCGTCC GGAAGATCTG GCGCTGGCGG AATTTTATCT GACCCGAACC ATCCACCAGG AGAAAGCATA A
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Protein sequence | MAATLLDVCA VVPAAGFGRR MQTECPKQYL SIGNKTILEH SVHALLAHPR VTRVVIAISP GDHRFAQLPL ANHPQITVVD GGNERADSVL AGLQAVAKAQ WVLVHDAARP CLHQDDLARL LTISENSRVG GILASPVRDT MKRGEPGKNA IAHTVERADL WHALTPQFFP RELLHDCLTR ALNEGATITD EASALEYCGF HPALVEGRAD NIKVTRPEDL ALAEFYLTRT IHQEKA
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